Gene Bamb_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1072 
Symbol 
ID4311131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1165575 
End bp1167098 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content69% 
IMG OID638148880 
Producthypothetical protein 
Protein accessionYP_772965 
Protein GI115351126 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00288] conserved hypothetical protein TIGR00288 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAC CCCTGGACAA CGTCAGCATG GCCGTGTTCT GCGACTTCGA GAACGTCGCG 
CTCGGCGTGC GCGACGCGAA GTACGAGAAA TTCGACATCC AGCCCGTGCT GGAGCGGCTG
CTGCTGAAGG GCAGCATCGT CGTGAAGAAG GCATATTGCG ACTGGGAGCG CTACAAGGGC
TTCAAGGCGT CGATGCACGA GGCGAGCTTC GAGCTGATCG AGATTCCGCA CGTGCGCCAG
TCGGGCAAGA ACTCGGCCGA CATCCGGCTC GTCGTGGACG CGCTCGATCT CTGCTACACG
AAGTCGCACG TCGACACGTT CGTGATCATC AGCGGCGACT CGGATTTTTC GCCGCTCGTG
TCGAAGCTGC GCGAGAACGC GAAGAAGGTG ATCGGGGTCG GCGTGAAGAA GTCGACGTCG
GACCTGCTGG TCGCGAACTG CGACGAATTC ATTTTCTACG ACGATCTGGT GCGCGAGCAG
CAGCGCGCGC AGGCGAAGCG CGAACAGCAG CACGCCGGTA ACGGCGGCGC GAAGCGGCCG
GACGAACCGT CGCGCAAGCC GGAGCTGGAA GCGCGCCGCA GCGAGGCGAT CGCGCTCGCG
GTCGAGACGT TCGATGCGTT GGCCTCGGAG CGCGACGACG TCGGCAAGAT CTGGGCGTCG
GTGCTCAAGA GCGCGATCAA GCGCCGCAAG CCGGACTTCA ACGAGTCGTA TTACGGCTTC
CGCGCGTTCG GCAACCTGCT GGACGAAGCG CAGGCGCGCG GGCTGCTCGA AGTGGGGCGC
GACGACAAGT CGGGCGCGTT CGTGTCGCGG CCGCGCCAGT CGTCCGTGGC GGAGCAGGCG
GCGGCGCGTG ATACGGGCGG CGCGCACCAT GGTCACGGCG CGCATCACGG TCACGGCGGG
CGTCATGCGG AAGCGGCAGC ACCGGCCGAG CGCCAGTCGC GGCGTCGCGG GCAGCGGGCG
GAAGCAGCCG TGCAGGAAAG CGTGCACGCC GACGCGCAAG AGGCGGCCGT CGTCGATGTC
ACGGATGAAG TGGCGCTCGT GCCGGCAGCG ACGGCCGAAG CGACTGTAGT GACCGAAGCG
ACTGAAGTGG CCGACACGCA CGGTGAAGCG AAGGACGGCC GCAAGCGCGC GCGCAAGAGC
GCGGCGAAGA AGACCGGCGC CAAGAAGGGC GGCGAAGCAA AGGGCGGCGA GGCAAAGGGT
GCCGGCCGTC AGGCGGCGGC GAAGCCGGAC GAGGCCGCGC ACGGCGGTGC GAAGCATGGT
GGCGACAAGC ACGCGCAAGG CATGCCTGCC GAAGCGACGC ATCGCGACAT GGAGCATCGT
GAGGAACGGC ACGTCGCGGC GCCGACGGCT GGCGAGTACG GCGCTCCGGC GGCTGCCGCG
CAGCCGGCGC ACGAAGCGGC ACCGGCTGCC GAATCGACCG GCGAGGCGGC TGGCGAAACC
GTCGCCGCAA AGCCGAAGAA ACCGGCCCGC AAGACGGCTC CCCGCGCGCG TCGTCCGCGC
AAGACGGCCA CCGCGGCCGA GTAA
 
Protein sequence
MALPLDNVSM AVFCDFENVA LGVRDAKYEK FDIQPVLERL LLKGSIVVKK AYCDWERYKG 
FKASMHEASF ELIEIPHVRQ SGKNSADIRL VVDALDLCYT KSHVDTFVII SGDSDFSPLV
SKLRENAKKV IGVGVKKSTS DLLVANCDEF IFYDDLVREQ QRAQAKREQQ HAGNGGAKRP
DEPSRKPELE ARRSEAIALA VETFDALASE RDDVGKIWAS VLKSAIKRRK PDFNESYYGF
RAFGNLLDEA QARGLLEVGR DDKSGAFVSR PRQSSVAEQA AARDTGGAHH GHGAHHGHGG
RHAEAAAPAE RQSRRRGQRA EAAVQESVHA DAQEAAVVDV TDEVALVPAA TAEATVVTEA
TEVADTHGEA KDGRKRARKS AAKKTGAKKG GEAKGGEAKG AGRQAAAKPD EAAHGGAKHG
GDKHAQGMPA EATHRDMEHR EERHVAAPTA GEYGAPAAAA QPAHEAAPAA ESTGEAAGET
VAAKPKKPAR KTAPRARRPR KTATAAE