| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0892 |
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| Symbol | |
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| ID | 4308822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 980194 |
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| End bp | 982104 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638148694 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_772785 |
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| Protein GI | 115350946 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.647896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACCG GCCAATCTGG GGCGCCCGCG CGCAGTGTGG GAAAATACGC GCTTTCCGCC
AGTTTTCGCG TCATGGATTC CGCATTCGAC CGAGCGTACG CCGCGCACCG CGCGGGCCGC
CTCGCCGAGG CCGAGCACGG CTATCGTGCC GCGCTCGGCA CCAATCCCGC CGACGCCGAC
GCGCTGCATC TGTTCGGTGT GCTGCGGCAT CAGCAGGGCC AGCATGCGGA GGCAGCCGAT
CTCGTCGGGC GTGCGGTCGA ATTGCGCCCG GGCGACGCCG CGCTGCAGCT CAATCTCGGC
AACGCGCTGA AGGCGCTTGG CCGGCTCGAC GAAGCGATCG AGCGGTTTCG CAACGCGCTG
ACGCTCGCGC CCGAATTCCC GCTCGCGCAC TACAACCTCG GTAACGCGTA CGCGGCGCTG
CAGCGCCACG AAGATGCCGT CGACGCGTTC GGCCGCGCAC TTCGGCTCAC GCCCGACGAC
GCATCGATCC ACAACAATCT CGGCAACGCG CTGAACGCGC TCGGCCGTCA CGACGATGCG
CTCGCCGCGT TCCATCGCGC ACTCGAGCTG CGGCCTGGAC ATGCCGGCGC GCACAACAAT
CTCGCGATGG CGCTAAACGC GATGGGCCGG GCCGACGACG CGATCGCGCA CTTCCAGGCG
GCGATCGCCG CGCAGCCGCG CTTCGTCGCC GCGCACTTCA ATCTCGGCAA CACGTTCGAG
GCGCTCGGCC GTCACGGCGA AGCCGCTGCG GCGTTCGAAG CCGCACTCGC GCTGCACCCG
CCGTTCCCGC TCGCCCTGTT CGGGCTCGCG AACGCGCTGT GCGCGCTCGG GCGCCAGCGC
GAAGCGCTGC CCTACTACGA ACGCGCGGTC GGCCTCGATC CGTCGTTCAG TCTCGCGTGG
CTGAACCTCG GCAATGCGCA TCACGCACTC GGCGCGCACG AAATGGCGCT GCGCGCGTTC
GACCAGGCGC TGCGCGTCGC GCCCGACCTG AAGCTCGCAC AACTGCACCG CGCGGTCACG
CTGCTGACGC TGGGCGACTT CACGCGCGGC CTGCCCGCGT ACGAAACGCG TCACGACACG
CCGGGCGCGA CACCGCGCGG CACGCTGCCG CGCTGGCAAG GCGAGCCGAT TGCGTCGCGC
ACGCTGCTGA TCCGCGCGGA ACAGGGCTTC GGCGACACGC TGCAGTTCGT CCGCTTCGTG
CCGCTGGCCC GCGCGCGCTG CGCACGCGTC GTGCTCGAAG TGCAGCCGGA ACTCGTCGCG
CTACTCGCGC CGGCGGCGAC GCGCTGGCGC GTGACGCTTG TCGCCCAGGG CGCGGCGAAG
CCGCCGGCCG CGGACATCGC ATGCACGCTG ATGAGCCTGC CTTTCCTGCT CGGTCTGCAG
CCGTCCGACA TCGTCGCGGG CAAGCGTTAC CTCGACGCGC CGGACAGCGC GCGCCGGCGC
TTTCGCGGCT CGCTCGGCGG CCAGTCGAAG CGCAAGTTCG GCCTCGCGTG GTCGGGGCGC
CGCCAGGCAC AGGAAAACCG CTCGATGCCG TTCGACGCGC TCGCACCGCT GCTCGCGCTG
CCGGACATCG ACTGGGTCGT GCTGCAGCCC GCGCTCGACG AAGACGAACG GGCGCGCGTC
GACGCGCATC CGCGCGTGCA TCACCTCGAC GGGGGGCTGA ACGACTTCGC CGACACGGCC
GCGCTGATCG AACGGCTCGA CGGCGTCGTC ACGATCGATA CGGCCGTCGC GCATCTGGCG
GGCGCGCTCG GCAAGCCGCT GTGGATCATG CTGCCGTTCG CGCCCGACTG GCGCTGGTTC
ACCGGCGACG ACTGTCCGTG GTATCCGCAC GCCAGGCTGG CCCGCCAGTC CGCACCGGGA
CAATGGCTCG ACGTGGCGGC GACGGTCGCC GACGCGCTGC GCGCCGCGTG A
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| Protein sequence | MPTGQSGAPA RSVGKYALSA SFRVMDSAFD RAYAAHRAGR LAEAEHGYRA ALGTNPADAD
ALHLFGVLRH QQGQHAEAAD LVGRAVELRP GDAALQLNLG NALKALGRLD EAIERFRNAL
TLAPEFPLAH YNLGNAYAAL QRHEDAVDAF GRALRLTPDD ASIHNNLGNA LNALGRHDDA
LAAFHRALEL RPGHAGAHNN LAMALNAMGR ADDAIAHFQA AIAAQPRFVA AHFNLGNTFE
ALGRHGEAAA AFEAALALHP PFPLALFGLA NALCALGRQR EALPYYERAV GLDPSFSLAW
LNLGNAHHAL GAHEMALRAF DQALRVAPDL KLAQLHRAVT LLTLGDFTRG LPAYETRHDT
PGATPRGTLP RWQGEPIASR TLLIRAEQGF GDTLQFVRFV PLARARCARV VLEVQPELVA
LLAPAATRWR VTLVAQGAAK PPAADIACTL MSLPFLLGLQ PSDIVAGKRY LDAPDSARRR
FRGSLGGQSK RKFGLAWSGR RQAQENRSMP FDALAPLLAL PDIDWVVLQP ALDEDERARV
DAHPRVHHLD GGLNDFADTA ALIERLDGVV TIDTAVAHLA GALGKPLWIM LPFAPDWRWF
TGDDCPWYPH ARLARQSAPG QWLDVAATVA DALRAA
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