Gene Bamb_0862 details

Gene Information

• Locus tag: Bamb_0862
• Symbol: greB
• ID: 4310867
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 947976
• End bp: 948539
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 638148663
• Product: transcription elongation factor GreB
• Protein accession: YP_772755
• Protein GI: 115350916
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01461] transcription elongation factor GreB

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0000987565
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAGG CGTTTGTCAA AGAGTCGGAC GGTGACGACG ACGATCTCGA CCCGAGTCAG 
CCCGCGATCC CGGCGGGCAC CAAGAACTAC ATCACGCCGG CCGGCCACAA GCGGCTCAGG 
GACGAACTCC TGAACCTGAT CGACGTCGAG CGTCCCGAGG TCGTGCGCCT CGTGTCGTGG 
GCCGCGTCGA ACGGCGACCG CTCGGAGAAC GGCGACTACA TCTACGGCAA GCGGCGGTTG 
CGCGAGATCG ACCGCCGGAT TCGCTTCCTG ACGAAGCGGC TCGATCTCGC CGAAGTCGTC 
GATGCGAGCC GGCAGGAGAA CGTCGACCAG GTGTTCTTCG GCGCGACCGT CGACTACGCG 
ACGCCGGACG GCGAGGACCA CACCATCACG ATCGTCGGGA TCGACGAGGT CGATCTCGAT 
CACGGTTGCG TCAGCTGGAT CTCGCCGGTC GCGCGGGCGC TCATCAAGGC GAAGATCGGC 
GATACCGTCA CGCTGATGAC CCCGGCCGGT CCGCAGCCGA TCGACGTGCT CGACGTTCGC 
TATCCGGCAC CGGGCAACGC GTGA 

 

Protein sequence

MNKAFVKESD GDDDDLDPSQ PAIPAGTKNY ITPAGHKRLR DELLNLIDVE RPEVVRLVSW 
AASNGDRSEN GDYIYGKRRL REIDRRIRFL TKRLDLAEVV DASRQENVDQ VFFGATVDYA 
TPDGEDHTIT IVGIDEVDLD HGCVSWISPV ARALIKAKIG DTVTLMTPAG PQPIDVLDVR 
YPAPGNA