Gene Bamb_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0810 
Symbol 
ID4309875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp894456 
End bp895127 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content71% 
IMG OID638148606 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_772703 
Protein GI115350864 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCG CCCCCGCCTC GATGATGTCC GACGGATTCT TCCTGTCGCT GTCGCTGTGT 
CTCGACATCG GCCTCGTCAA CGTCGCGATG CTGTCGCTGA CGCTGTCGCA CGGCTTCCGG 
CCGGGCTTCT GGCTCGGCGT CGGCTCGTGC GTCGGCGATC TCGTCTACGC GGCGCTCGCG 
CTCGCGGGCA TGGCCGTGCT GCTGCAGTTC GAGGCCGTGC GCTGGATCGT CTGGATCGGC 
GGCGGCGCGG TGCTGCTGTT CCTCACGTGG AAGATGGCGC GTGAAGCGCT CGCGCCGGCC 
GGCGGCGCCG ACGCGGGCGA TGCCGACGAC ACGCCGCAGC CGCGGGCCAG CGCGCGGCGC 
AGCTTCGTGC GCGGGATGCT GCTCGCGATG TCGTCGCCGA GCGCGATCCT GTGGTTCGCG 
GCGGTCGGCG GCGCGCTGAT CGCGAAAGCC GGCGCGACCA CGCCGGCAAC GGCGTCGGTG 
TTCCTGTCCG GCTTTTTCCT CGGCGGCCTC GCGTGGACGC TCTTCATGTG CACGCTCGCG 
AGCCAGGGCC GCAAGCGCGC GGGCGCCGGG CTGATGCGCG CGTGCCATGT CGCGTCGGCA 
CTGCTGTTCG CGTATTTCTC GTACAGCGTG ATCGTCGGCG GCTATCGCGA CCTGATCGTT 
CACGCGGTGT GA
 
Protein sequence
MSFAPASMMS DGFFLSLSLC LDIGLVNVAM LSLTLSHGFR PGFWLGVGSC VGDLVYAALA 
LAGMAVLLQF EAVRWIVWIG GGAVLLFLTW KMAREALAPA GGADAGDADD TPQPRASARR 
SFVRGMLLAM SSPSAILWFA AVGGALIAKA GATTPATASV FLSGFFLGGL AWTLFMCTLA 
SQGRKRAGAG LMRACHVASA LLFAYFSYSV IVGGYRDLIV HAV