| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0745 |
|---|
| Symbol | |
|---|
| ID | 4309304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 824542 |
|---|
| End bp | 825291 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638148540 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_772638 |
|---|
| Protein GI | 115350799 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.751265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTTA TCGAATTGCA GAGCGTAACG CTCGATTTGC CGATTTTCGA TGTGCAGGGG
CGCTCGCTCA AGAAGCAGGT GCTCAACATG GGGCGTCGCA ACAGGATCGC CGAGGGCAAC
GACGGCGTGA TCGTCGTGCG CGCGCTCGAC GACGTGAGTT TTCGCTTCGA GCGTGGCGAT
CGCGTGGGCC TGATCGGGCA CAACGGGGCG GGGAAATCGA CATTGCTTCG TGCGATGGCG
GGCATCTATC CGCCGTCGGC GGGCCAGTTG TCGCGTGAAG GAAAAGTGGT GCCGCTCCTC
GATATCGGCC TCGGTATGGA CGAGAACTCG ACCGGCATGC AGAACATCCG GCTCAGAGGC
CTGCTGCTCG GCATGTCCGA TGCGGAGATT CGTTCGAAAC AGCGCGACAT CGCGGAATTC
TGCGAACTCG GCGATTATCT GGACCTTCCG ATCCGCACGT ACTCCAGCGG GATGAAGGTG
CGGCTCGCGT TTGCAGTATC GACGGCGGTC GATGCCGAAA TCCTGTTGCT CGACGAGGTA
ATGGGAGTCG GCGACGCATC GTTCATGCAC AAGGCCGAAG CGCGATTGGC GGACCTGCAC
AGCCGTGCGG AAATCGTCGT GCTGGCGATG CACTCGAACT CCGAAATCCG AAAGGTGTGC
AACAAGGTCC TTTGGATGGA GCGTGGCCGT GTGCGCGCTT TCGGGCCGAC GGAAGAGGTC
GTGTCGGCTT ATGAGGCGAC AACAGGCTGA
|
|---|
| Protein sequence | MAFIELQSVT LDLPIFDVQG RSLKKQVLNM GRRNRIAEGN DGVIVVRALD DVSFRFERGD
RVGLIGHNGA GKSTLLRAMA GIYPPSAGQL SREGKVVPLL DIGLGMDENS TGMQNIRLRG
LLLGMSDAEI RSKQRDIAEF CELGDYLDLP IRTYSSGMKV RLAFAVSTAV DAEILLLDEV
MGVGDASFMH KAEARLADLH SRAEIVVLAM HSNSEIRKVC NKVLWMERGR VRAFGPTEEV
VSAYEATTG
|
|---|
| |