Gene Bamb_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0716 
Symbol 
ID4309004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp796737 
End bp797375 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID638148511 
ProductDSBA oxidoreductase 
Protein accessionYP_772609 
Protein GI115350770 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.759492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCG GCCTCGATAC TGCCCAACCC GCGTGGTTCT ACGACTTCGT GTCGCCGTTC 
TCCTATCTGC TGCTCGAACA GCTCGACAAA TGGCCCGACG TGCCGTTCGA ACCCGTCGCC 
GTGTCGCTGC TCGACCTGCA GCGTCACTGG GGACAACGCC CGAGCGCCGA AGTACCGGCC 
AAGCGCGTGT TCACGTACCG CCACGCGCTG TTTCGCGCCG AACAGCTCGG CATCCGCTTC 
AAGATGCCGC CCGCCCATCC GTTCGATTCC GACAAGGTGC TGCGCCTCGC GCTCGCGCTG 
CGCGCCGATA TCGCGACCGT GCTGGAAATG TTCCGCTTCA TCTGGCACGA CGGCAACGAT 
CCGTCGACGC CGGACGGCTT CGCCGCGCTG TGCGAACGCG TCGGCGTGAG CCACGGCGAC 
GAGCTGATCG AATTCGAGGA AACGAGCGCG CAGTTGCGCC GCAACACCGA CGACGCGATC 
GCGCTCGGCG TGTTCGGCGT CCCGACCTTC TGGATGAACC AGCAGCTGTT CTGGGGCGAG 
GACGCGCTGC CGATGGTGCT GTACTGCGCG CGCACGCCGA ACTGGCTCGA GTCGCGCGAG 
GTCAAGCGGA TCAGCACGCT GCCGAAGGGC CGCGTGTGA
 
Protein sequence
MTTGLDTAQP AWFYDFVSPF SYLLLEQLDK WPDVPFEPVA VSLLDLQRHW GQRPSAEVPA 
KRVFTYRHAL FRAEQLGIRF KMPPAHPFDS DKVLRLALAL RADIATVLEM FRFIWHDGND 
PSTPDGFAAL CERVGVSHGD ELIEFEETSA QLRRNTDDAI ALGVFGVPTF WMNQQLFWGE 
DALPMVLYCA RTPNWLESRE VKRISTLPKG RV