Gene Bamb_0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0652 
Symbol 
ID4311305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp733701 
End bp735086 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content68% 
IMG OID638148446 
Productpoly(A) polymerase 
Protein accessionYP_772545 
Protein GI115350706 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID[TIGR01942] poly(A) polymerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGGCCA GCGTGCATCA GATCGATCCA TCGCTGATCT CGCGGAACGC GGTGCGCGTG 
ACCGACACGC TGCAGCAGGC GGGTTTTCGC GCGTTCATCG TCGGCGGCGC GGTGCGCGAC
CTGCTGCTCG GCATCGCGCC GAAGGACTTC GACGTCGCGA CCGACGCGAC GCCGACCGAG
GTGCAGCGCC TGTTCCGCCG TGCGCGCCTG ATCGGCCGCC GCTTCCAGAT CGTCCATGTG
CAGTTCGGCC AGGAATTGAT CGAGGTGTCG ACGTTCCGCG CCATGGTCGA CGCGCCGCCC
GAAGCCGCCG CGGCCGAGCC GCCGAAGCGG CTGAAGCGCG ACGAACTCGA TCGCCGCACG
CATGCGGTGG ATGCAAGCGG CCGCGTGCTG CGCGACAACG TCTGGGGCGA GCAGCACGAA
GACGCCGCGC GCCGCGACTT CACGATCAAC GCGATGTACT ACGACCCGTC GACGCAGACG
GTGCTCGACT ACCACGACGG GATGGCCGAC ATCCGCGCCC GCCTGCTGCG GATGATCGGC
GATCCGGCCA CGCGCTATCG CGAGGATCCG GTGCGGATGC TGCGCGTGGT GCGCTTCGCG
GCGAAGCTCG GCTTCGAGAT CGAGACGCAC ACGCGCGAGC CGATCAACGC GTTGGCCGAC
CTGATCAACA ACGTGCCGGC CGCGCGCCTG TTCGACGAAA TGCTGAAGCT GCTGCTGTCG
GGCCAGGCGC TCGCATGCCT GCAGCGTCTA CGCAAGGAAG GCCTGCACCA CGGGCTGCTG
CCGCTCCTCG ACGTCGTGCT CGAACAGCCG CAGGGCGAGA AGTTCATCAC GCTCGCGCTG
AACAACACCG ACGCGCGCGT GCGCGCCGGC AAGACGGTGT CGCCGGGCTT CCTGTTCGCG
ACGCTGCTGT GGCACGACAT GCGCCAGCGC TTCGAACAAT ACACGGCCGA AGGCGAAATC
CCGGTGCCGG CGCTCCATCG CGCGATGGAC GACGTGATCG ACATGCAGAC CGAGAAGCTC
GCGATCCACA AGCGCTACTC GGCCGACATG CGCGAAATCT GGGGGCTGCA GTTGCGCCTC
GAAAAACGCT CGGGCCGCAG CGCGATGCGG CTGCTGGAAC ACCAAAGGTT TAGAGCGGGG
TATGATTTCC TCCTGTTACG CTGCGAATCC GGCGAGCTGG AAGCAGCTGT CGGCCAGTGG
TGGACGGATT TCATCGAAGG CGACGCAGCC GCTCGTGAGG CACTCCTCAC GCAGGGCGGC
TCGAAGGAAA AATCGCCCCG CAAGCGGCGC CGCCGCGGTG GTGTGCGAAA CCGCAAGCCG
GACGAAGGCG CAGCCGAGCA GGCGCCGGAC ACCGCGGGCG GTACCGCGAG CGGTTCCGAC
GACTGA
 
Protein sequence
MPASVHQIDP SLISRNAVRV TDTLQQAGFR AFIVGGAVRD LLLGIAPKDF DVATDATPTE 
VQRLFRRARL IGRRFQIVHV QFGQELIEVS TFRAMVDAPP EAAAAEPPKR LKRDELDRRT
HAVDASGRVL RDNVWGEQHE DAARRDFTIN AMYYDPSTQT VLDYHDGMAD IRARLLRMIG
DPATRYREDP VRMLRVVRFA AKLGFEIETH TREPINALAD LINNVPAARL FDEMLKLLLS
GQALACLQRL RKEGLHHGLL PLLDVVLEQP QGEKFITLAL NNTDARVRAG KTVSPGFLFA
TLLWHDMRQR FEQYTAEGEI PVPALHRAMD DVIDMQTEKL AIHKRYSADM REIWGLQLRL
EKRSGRSAMR LLEHQRFRAG YDFLLLRCES GELEAAVGQW WTDFIEGDAA AREALLTQGG
SKEKSPRKRR RRGGVRNRKP DEGAAEQAPD TAGGTASGSD D