| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0513 |
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| Symbol | |
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| ID | 4309177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 576754 |
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| End bp | 578844 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638148307 |
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| Product | ribonuclease II |
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| Protein accession | YP_772406 |
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| Protein GI | 115350567 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGTTT TCTTCGAGGA ATCGGGCAGT TTCAAGGCGG GCAGCGTGCT GTCGCGCCAG
GGCGACGCGT TTCAGGTCGA GTTGCCCGGC GGGCGGCGGG CGAAGGTGCG CGCAAAAGAC
GTGCTGATCG AATTCGAGAA GCCGGCCGCG AGCGAACTGA TGCAGGAAGC CGACACGGCC
GCGCAGCAGA TCGACCTGGA TTTCCTGTGG GAATGCGCGC CGGCGGAAGA ATTCACCTAC
ACGGCGCTGG CCGCGGAATA CTTCGGCGCG ACCTACGGGG CGGTCGAGCG CGCGGCGCTG
GTGCTGCGGC TGCACGGCTC GCCCGTCTAC TTCCGCCGCA AGGGGCGCGG CCAGTACCAG
CGCGCGCCGG AAGATCAGCT CAAGATGGCG CTCGCGTCGC TCGAGCGCAA GCGCCAGCAG
GCGCTCGTCC AGGTCCAGTA TGAAGAGGAG CTGAAGGCCG GCAAGCTGCC GGAGGCGTTC
GCGGGCAAGG TGCTCGGGCT GCTGACGCGG CCGGACAAGA ATTCGATCGA ATACAAGGCG
CTCGAGGCGG CGGCCGGCGC GCGCGGCGTG TCGCCGGCGC GGCTGATGCT CGACTGCGGC
GGCGTCGCGT CGGCGCGTGC GCTGCACGAG GCGCGTTTCC TCGCAGAATT TTTCCCGCAC
GGCACGGGCT TTCCGCCCGT CACGGTCGGC CCGCTGCCGG ACGACCTGCC GCGCGCGGAC
GTCGAGGCGT TCTCGATCGA CGACGTCACG ACGACCGAAA TCGACGATGC GTTCTCGGTC
GAGCACCTGG CCGACGGTCG CGTGCGGATC GGCGTGCACA TCGCGGCGCC GGCGCTCGGC
ATCGTGCGCG GCGACGCGGT CGATGCGATC GCCCGTACGC GCCTGTCGAC CGTCTACATG
CCGGGCGACA AGATCACGAT GCTGCCGGAC GACGTCGTCG ACGTGTTCAC GCTGAAGGAG
GGCGACTACC GCCCGGCGCT GTCGCTGTAC ATCATCGTCA ACCGCGAGAC GCAGGACATC
GTCGCGAACG AGACGCGCGC CGAACTCGTG TACGTGAAGA GCAACCTGCG CCACAACACG
CTCGACGAGC TCGTCAACGA GGAGACGCTC GCGGCCGGCA CCGGCGACTA CCCGCACAAG
GACGACATCG CCGTGCTGTG GCCGCTCGCG CAGGCGCTGT TCGAGAAGCG CCAGGTCGCG
CGCGCGGGCT ATGGCCTGAA GCGCGAGGTG CAGCGCAACA CCGACTACAA CTTCTACGTC
GAAGGCGAGC ACGTGACGAT CACGCCGCGT CGCCGCGGGT CGCCGCTCGA CCTGATCGTG
TCGGAGCTCG CGATCCTCGC GAACTCGACG TGGGGTGCGT TCCTGCACGA TCACACGGTG
CCGGGCATCT ACCGCTCGCA GCGCGGCTTC GGCGCGCCGG GCCCGAAGCG CACGCGGATG
CAGACGTCGG CCGCGCCGCA CGAAGGCCTC GGCGTCGCGC AGTACGCGTG GAGCACGTCG
CCGCTGCGCC GCTACGTCGA CCTCGTGAAC CAGTGGCAGC TGCTCGCGTG CGTGCAGCAC
GGCGTCACCG CGAAGCTCGC CGCGCCGTTC AAGCCGAAGG ACGCCGACCT GTACGCGGTC
GTGCAGGGCT TCGACGACAC CTATACCGCG TACGCCGACT ACCAGCGCCG GATGGAATAC
TTCTGGTGCC TGCGCTGGCT CGCGCAGGAG CAGAAGAAGC AGGTCGTCGC GAGCGTCGTG
AAGGGCGATC TCGTGCGTCT CGAGGAAATT CCGCTGCTGC TGCACGTGCC GGGGCTCGGC
GTGCATGCGC GCGGCACGCG CGTGCTGCTC GACGTGATGT CGCTCGACGA GCTGACGATC
GAGGCGTCGG TGCGACTGCT GAACGTGCTC GACGCGCCGA CCGTGACGAG CGGCGAGGCG
GCCGAGGACG AAGACGAAAC CGAAGGCGGC GACGACACGC TGGTCGATGC GGAAGACGCG
TCGGCGCAAA CCGAGGCCGA AGCGCTGGCC GAATCGGACG GCGCGGCGGC CGAAGGCGGC
GATGCCGCGA CCGGCAACGG CCAGGCAAGC GAAGAGGGCC GCGCATCATG A
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| Protein sequence | MNVFFEESGS FKAGSVLSRQ GDAFQVELPG GRRAKVRAKD VLIEFEKPAA SELMQEADTA
AQQIDLDFLW ECAPAEEFTY TALAAEYFGA TYGAVERAAL VLRLHGSPVY FRRKGRGQYQ
RAPEDQLKMA LASLERKRQQ ALVQVQYEEE LKAGKLPEAF AGKVLGLLTR PDKNSIEYKA
LEAAAGARGV SPARLMLDCG GVASARALHE ARFLAEFFPH GTGFPPVTVG PLPDDLPRAD
VEAFSIDDVT TTEIDDAFSV EHLADGRVRI GVHIAAPALG IVRGDAVDAI ARTRLSTVYM
PGDKITMLPD DVVDVFTLKE GDYRPALSLY IIVNRETQDI VANETRAELV YVKSNLRHNT
LDELVNEETL AAGTGDYPHK DDIAVLWPLA QALFEKRQVA RAGYGLKREV QRNTDYNFYV
EGEHVTITPR RRGSPLDLIV SELAILANST WGAFLHDHTV PGIYRSQRGF GAPGPKRTRM
QTSAAPHEGL GVAQYAWSTS PLRRYVDLVN QWQLLACVQH GVTAKLAAPF KPKDADLYAV
VQGFDDTYTA YADYQRRMEY FWCLRWLAQE QKKQVVASVV KGDLVRLEEI PLLLHVPGLG
VHARGTRVLL DVMSLDELTI EASVRLLNVL DAPTVTSGEA AEDEDETEGG DDTLVDAEDA
SAQTEAEALA ESDGAAAEGG DAATGNGQAS EEGRAS
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