Gene Bamb_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0427 
Symbol 
ID4309790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp477882 
End bp478751 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content62% 
IMG OID638148215 
Productalpha/beta hydrolase fold 
Protein accessionYP_772320 
Protein GI115350481 
COG category[R] General function prediction only 
COG ID[COG4757] Predicted alpha/beta hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGGC GTTCGACAAC TCGCGTCAGC ATCGCTTTCT CCGCCCACGA CGGATTCCGG 
CTCAACGGCA CCTATTTCCC GGCGGCCGAC GGCGATCGTT CCCCCGTGCT CATCTGCCCT
GCGACAGGAA TCCGGCAGTC TTTTTACTTC CCGTTCGCGG ATTGGCTGAG CAAAGCCGGT
CATTCGACGT TCGTATTCGA TTACCGAGGG ATCGGCGCGT CGCTCGATAC CGGTCACGTC
CGCGATTCCC GTGCGCGGAA ACAGGACTGG GGGCAACTCG ACATGCCGGC GGCGCTCGAC
TGGCTCCTTG GCGAAACCGG TGCGCGCGGC GCACATTTGA TCGGACATAG CGCAGGCGCA
CAACTGGTCG GCCTGATGCC GAATCATGCG TCGGTTCGTT CGTTGTGCGC AATCTCCGCG
TCTTCCGGCT ATGTCGGCAA CATTCGCTGG CCAAAACGTT TCGCGGCCTT GCTGCTTGCG
CATATGTATG TGCCGCTTTC CATTCGTTTG CTCGGGTACG TTCCGGCTAA AGCACTCGGC
TGGGGTGACG ATCTGCCGCC GCGCGTCGGA ATTCAGTGGG CCCGATGGTG CAGTCGGCCG
GGATATGTGG CAAACGAATT CGGATCAGGG GTGGCGCGCC ACTACTACGA CGAATTTACC
GCTCCCGTCA TCGTTGTGGC CGCAACCGAC GACCCCCTTG CCACGCCAGC CAATATCGCA
GACTGGCTGC GCCTGCTGCC GAGAGCGAAG TCCGACGTCC ACTTCATCCA TCCCGACAAC
CCCGACGGCC GAGCAATCGG GCACGTCGGC ATGTTCCGGC GCGAGCATTC GTCGCTGTGG
CCGGAACTCA CCAGGGGATT GCTGCGCTGA
 
Protein sequence
MTGRSTTRVS IAFSAHDGFR LNGTYFPAAD GDRSPVLICP ATGIRQSFYF PFADWLSKAG 
HSTFVFDYRG IGASLDTGHV RDSRARKQDW GQLDMPAALD WLLGETGARG AHLIGHSAGA
QLVGLMPNHA SVRSLCAISA SSGYVGNIRW PKRFAALLLA HMYVPLSIRL LGYVPAKALG
WGDDLPPRVG IQWARWCSRP GYVANEFGSG VARHYYDEFT APVIVVAATD DPLATPANIA
DWLRLLPRAK SDVHFIHPDN PDGRAIGHVG MFRREHSSLW PELTRGLLR