Gene Bamb_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0401 
Symbol 
ID4309782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp451163 
End bp452296 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content72% 
IMG OID638148189 
Productmethyltransferase small 
Protein accessionYP_772294 
Protein GI115350455 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.995483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGATT TCCCCGTTTT CCACTGGACC GACGCCGACG GCGCCGAACA TGCCGTGCGC 
TGGCGCTCCG AAGCCGGCGT GCAGCCGCCG AAGCGCGCCG TGCCGGCCGA TGACCGCCTC
ACCGCCGATG CCGCGTACCG CCTCGCATGC GAGGGCACCG CGCTCGTCTG GCAGGGCGAC
TTCCAGAATG CGCGCCAGCT CGTGCAGGCG ATGGCCCGCC GCGTCGAACG CAAGCCGAAG
AAGGCGAAGG CCGCGGCCGG CGCCGACGCA TTCAACCTGC ATCGGCTCGC GCAATCGCAG
CGCGCCCGCA CGCTCGGGAT GCTGCTGATC CCGCTCGATG CCGACTACAG GATCCCGCTG
CGCCGCGCGC CCGACGTGCG CGCCGCGTGC GAGGAAGCGT ACGGGCCGGG CGGCGCGCCG
TCGGTCGTGT CGCTGCGCGA ACTGCTCGGT CTCGTCGGCG CGCACGAATG GCGCAAGAAG
GGCGTGCCGA TTCCGGCGCT CGGCGGCGCG CCGATCCATC CGCATTACGG CGTGTTTTCG
CCGGTGCGCG GCGAATACGT CGAACTCGTC GCGCGCGCGC CGCTGCCGGC GACGTCGCTC
GCGTTCGACA TCGGCACCGG CACCGGCGTG CTCGCGGCCG TGCTCGCATC GCGCGGCGTC
GAGCGTATCG TCGCGACCGA CCAGGATCCG CGCGCGCTTG CGTGTGCACG CGAGAACATC
GCGCGGCTCG GCCACGCCGA TCGCGTCGAC ATCGTCGAAG CCGACCTGTT TCCGGCCGGC
CGCGCGCCGC TCGTCGTGTG CAACCCGCCG TGGGTGCCGG CCCGCCCGAG CGCGCCGATC
GAATATGCGG TCTACGATCC CGACAGCCGC ATGCTGCGCG GTTTCCTCGC CGGGCTCGCC
GACCATCTCG AACCGCGCGG CGAAGGCTGG CTGATCCTGT CCGATTTCGC CGAGCATCTC
GGCCTGCGGC CGCGTGAAAC GTTGCTGCAA TGGATCGATG AAGCCGGTCT CGTGGTGCTC
GGCCGCGAAG ACATCCGCCC CGCGCATCCG AAGTCGACCG ACGCGGACGA TCCGCTGCAC
GCGGCACGCC GCGCCGAGCT CACGTCGCTC TGGCGGCTCG GCGCGCGGGC CTGA
 
Protein sequence
MTDFPVFHWT DADGAEHAVR WRSEAGVQPP KRAVPADDRL TADAAYRLAC EGTALVWQGD 
FQNARQLVQA MARRVERKPK KAKAAAGADA FNLHRLAQSQ RARTLGMLLI PLDADYRIPL
RRAPDVRAAC EEAYGPGGAP SVVSLRELLG LVGAHEWRKK GVPIPALGGA PIHPHYGVFS
PVRGEYVELV ARAPLPATSL AFDIGTGTGV LAAVLASRGV ERIVATDQDP RALACARENI
ARLGHADRVD IVEADLFPAG RAPLVVCNPP WVPARPSAPI EYAVYDPDSR MLRGFLAGLA
DHLEPRGEGW LILSDFAEHL GLRPRETLLQ WIDEAGLVVL GREDIRPAHP KSTDADDPLH
AARRAELTSL WRLGARA