Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0401 |
Symbol | |
ID | 4309782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 451163 |
End bp | 452296 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638148189 |
Product | methyltransferase small |
Protein accession | YP_772294 |
Protein GI | 115350455 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.995483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGATT TCCCCGTTTT CCACTGGACC GACGCCGACG GCGCCGAACA TGCCGTGCGC TGGCGCTCCG AAGCCGGCGT GCAGCCGCCG AAGCGCGCCG TGCCGGCCGA TGACCGCCTC ACCGCCGATG CCGCGTACCG CCTCGCATGC GAGGGCACCG CGCTCGTCTG GCAGGGCGAC TTCCAGAATG CGCGCCAGCT CGTGCAGGCG ATGGCCCGCC GCGTCGAACG CAAGCCGAAG AAGGCGAAGG CCGCGGCCGG CGCCGACGCA TTCAACCTGC ATCGGCTCGC GCAATCGCAG CGCGCCCGCA CGCTCGGGAT GCTGCTGATC CCGCTCGATG CCGACTACAG GATCCCGCTG CGCCGCGCGC CCGACGTGCG CGCCGCGTGC GAGGAAGCGT ACGGGCCGGG CGGCGCGCCG TCGGTCGTGT CGCTGCGCGA ACTGCTCGGT CTCGTCGGCG CGCACGAATG GCGCAAGAAG GGCGTGCCGA TTCCGGCGCT CGGCGGCGCG CCGATCCATC CGCATTACGG CGTGTTTTCG CCGGTGCGCG GCGAATACGT CGAACTCGTC GCGCGCGCGC CGCTGCCGGC GACGTCGCTC GCGTTCGACA TCGGCACCGG CACCGGCGTG CTCGCGGCCG TGCTCGCATC GCGCGGCGTC GAGCGTATCG TCGCGACCGA CCAGGATCCG CGCGCGCTTG CGTGTGCACG CGAGAACATC GCGCGGCTCG GCCACGCCGA TCGCGTCGAC ATCGTCGAAG CCGACCTGTT TCCGGCCGGC CGCGCGCCGC TCGTCGTGTG CAACCCGCCG TGGGTGCCGG CCCGCCCGAG CGCGCCGATC GAATATGCGG TCTACGATCC CGACAGCCGC ATGCTGCGCG GTTTCCTCGC CGGGCTCGCC GACCATCTCG AACCGCGCGG CGAAGGCTGG CTGATCCTGT CCGATTTCGC CGAGCATCTC GGCCTGCGGC CGCGTGAAAC GTTGCTGCAA TGGATCGATG AAGCCGGTCT CGTGGTGCTC GGCCGCGAAG ACATCCGCCC CGCGCATCCG AAGTCGACCG ACGCGGACGA TCCGCTGCAC GCGGCACGCC GCGCCGAGCT CACGTCGCTC TGGCGGCTCG GCGCGCGGGC CTGA
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Protein sequence | MTDFPVFHWT DADGAEHAVR WRSEAGVQPP KRAVPADDRL TADAAYRLAC EGTALVWQGD FQNARQLVQA MARRVERKPK KAKAAAGADA FNLHRLAQSQ RARTLGMLLI PLDADYRIPL RRAPDVRAAC EEAYGPGGAP SVVSLRELLG LVGAHEWRKK GVPIPALGGA PIHPHYGVFS PVRGEYVELV ARAPLPATSL AFDIGTGTGV LAAVLASRGV ERIVATDQDP RALACARENI ARLGHADRVD IVEADLFPAG RAPLVVCNPP WVPARPSAPI EYAVYDPDSR MLRGFLAGLA DHLEPRGEGW LILSDFAEHL GLRPRETLLQ WIDEAGLVVL GREDIRPAHP KSTDADDPLH AARRAELTSL WRLGARA
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