| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0311 |
|---|
| Symbol | aroK |
|---|
| ID | 4308785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 352011 |
|---|
| End bp | 352565 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638148099 |
|---|
| Product | shikimate kinase |
|---|
| Protein accession | YP_772205 |
|---|
| Protein GI | 115350366 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAGCGC GGGACCCACA CGCAAACGTA TTTTTCGTCG GCCTTATGGG AGCGGGTAAG
ACCACCGTGG GCCGTGCGGT CGCGCGCCGG CTCGACAGGA CGTTCTTCGA CTCCGACCAC
GAAATCGAGG CCCGCACGGG TGCGCGCATT CCGGTGATCT TCGAGATGGA AGGCGAGGCC
GGCTTTCGCG ACCGCGAATC GCAGGTGATC GCGGATCTCA CGCAGCGCGA GAACATCGTG
CTCGCGACGG GCGGCGGCGC GGTGTTGCGC GCCGAAAATC GCGATTGCCT GAAAGGCCAC
GGCATCGTCA TCTATCTGCG CGCCAATCCG CACGATCTGT GGCTGCGCAC GCGCAAGGAC
AAGAACCGCC CGCTGTTGCA GACCGGCGAC CCGAAGGCGC GTCTCGAAGC GCTCTACGAA
GTGCGCGATC CGCTGTACCG CGAATGCGCG GACTTCATCA TCGAGACCGG CCGTCCGTCG
GTCAACGGCC TCGTCAACAT GGTGCTGATG CAACTCGAAC TCGCAGGCGT CATCGCCAAG
CCGCTACAAG CATGA
|
|---|
| Protein sequence | MQARDPHANV FFVGLMGAGK TTVGRAVARR LDRTFFDSDH EIEARTGARI PVIFEMEGEA
GFRDRESQVI ADLTQRENIV LATGGGAVLR AENRDCLKGH GIVIYLRANP HDLWLRTRKD
KNRPLLQTGD PKARLEALYE VRDPLYRECA DFIIETGRPS VNGLVNMVLM QLELAGVIAK
PLQA
|
|---|
| |