Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0296 |
Symbol | |
ID | 4311300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 334241 |
End bp | 336076 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638148084 |
Product | protein-disulfide reductase |
Protein accession | YP_772190 |
Protein GI | 115350351 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4232] Thiol:disulfide interchange protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.58017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAACG GTATGGCGCT TTCCGTGCGC ATGCGCGCAC CGCGATTCCT CGCGATCCTG TTGTCGTTCA TTTTCGTGCT GGGCTGCCTG TCGGTCGCGC GTGCGGCCGA CGATTTTCTC GATCCGTCGG TGGCGTTCAA GTTCAGCGCG AGTGAATCGC CGGGGCAGGT GGACGTCCGC TTCAAGGTCG CCAACGGCTA CTACCTGTAC CGCGAGCGGT TCGCGTTCGC GGTGAAGAGC GGACAGGCGA CGCTCGGCGC CCCGACATTC CCGCCCGGAC ATGTGAAGTT CGACCAGACG TTCCAGAAGG AAGTCGAGAC CTATCGCGAC GAAGTCGTGA TTCACGTGCC GGTCAAGCAG GCAGCGGGGC CGTTCGAGCT CGCGGTGACG TCGCAGGGGT GTGCCGACGA AGGGATCTGC TATCCGCCTG CCGAGCATGT CGTGAAGGTC GACGGCGCGG CGCTGGGCGC GACCGCGCCG GCCGATGGCG CGACGGCTTC GGGCAGCTGG TTCGACAAGG TCACGAGCGC GGATTTCGCG CAGTCGCTGC TCGAGGGGCA CGGCTTCTTC ACGATCGTCG CGCTGTATTT CGTCGCGGGC GTCGTGCTGA GTCTGCTGCC CTGCTCGTAT CCGATGATTC CGATCGTATC CGCGATCATC ATCGGTCAGG GCACGCGCGC GACGCATGCG CGCGGCTTTG CGCTGTCGCT CACCTACGTG GTCGGCATGG CGCTCGTTTA TACGGTGCTT GGCATCGCGG CGGCGCTGGT CGGCCAGAGC CTCGGTGCGT GGCTGCAGAA TCCGTGGGTG CTCGGCGCGT TCGGTCTGAT TCTTACCGCC TTCGCGGTAT CGCTGATTTC GGGCAAGGAC ATCGCGCTGC CCGAGCGCTG GCAAAACGGC GCGGCCGAAG CATCGAGCGC GCGCCAGGGC GGTCACTTCA TCGCGGTCGC CGCGATGGGC GCGTTGTCGG CGCTGGTCGT CGGCGCATGC ATGACGGCGC CGCTCTTTGC GGTGCTCGCG TTCATCGCGC ATACCGGCAA TGCGTTGCTC GGCGGCGCCG CGCTGTTCGC GATGGGGCTG GGGCTCGGCG TGCCGCTGCT CGTGGTCGGC ATCGGTGCGG GTACGGTGCT GCCGCGCGCG GGCGCCTGGA TGGACAGCGT CAAGGTGTTC TTCGGCATCG TGCTGCTCGC CGCCGCGCTG TGGATCGTGT GGCCGGTGCT CGCGGGCGGT CTGAAGATGG TCCTCGCCGC GTTGTGGCTG CTGGTTGCCG CCGCGGCGCT CGGCCTGTTC ACGCCGCATG CCGGCGCCGC GTCGATCTGG CGCCGTCTCG GCCGCGGTCT CGGTGCGGCG CTCGCGATCT GGGCTGCGAC GCTGCTCGTC GGTCTCGCTG CTGGTTCCAA CGACCCGGTG AAGCCGCTGG CCGTTCTTGC GGCGCGCACG GTTGCGTCGG GCGATGCACC GGCGGCCGCA CAGCAGGGGC CTGCGTTCGC ATCGGTGCGC TCCAGTGGCG AACTCGACAC GCTGCTGAAG ACCTCGGGTC GGCCCGTGAT GCTCGATTTC TACGCCGACT GGTGCGTGAG CTGCAAGGAG ATGGAGCATC TGACGTTCAC GGATTCGCGC GTGCAGGCGC GGCTCGCGCA GCTTCATCTG GTGCGAGCGG ACGTCACCGC GAACAATCCG GACGACCAGG CGCTGCTCAA GCGCTTCAAC CTGTTCGGGC CGCCGGGCAT CATCTTCTTC GATCGCAACG GCCACGAAAT CGGCCGCGTG GTCGGCTATC AGGCGGCCGA CACATTCCTG CGCAGCCTCG ATCGCGCAGC GGTACCGACG GTGTAA
|
Protein sequence | MFNGMALSVR MRAPRFLAIL LSFIFVLGCL SVARAADDFL DPSVAFKFSA SESPGQVDVR FKVANGYYLY RERFAFAVKS GQATLGAPTF PPGHVKFDQT FQKEVETYRD EVVIHVPVKQ AAGPFELAVT SQGCADEGIC YPPAEHVVKV DGAALGATAP ADGATASGSW FDKVTSADFA QSLLEGHGFF TIVALYFVAG VVLSLLPCSY PMIPIVSAII IGQGTRATHA RGFALSLTYV VGMALVYTVL GIAAALVGQS LGAWLQNPWV LGAFGLILTA FAVSLISGKD IALPERWQNG AAEASSARQG GHFIAVAAMG ALSALVVGAC MTAPLFAVLA FIAHTGNALL GGAALFAMGL GLGVPLLVVG IGAGTVLPRA GAWMDSVKVF FGIVLLAAAL WIVWPVLAGG LKMVLAALWL LVAAAALGLF TPHAGAASIW RRLGRGLGAA LAIWAATLLV GLAAGSNDPV KPLAVLAART VASGDAPAAA QQGPAFASVR SSGELDTLLK TSGRPVMLDF YADWCVSCKE MEHLTFTDSR VQARLAQLHL VRADVTANNP DDQALLKRFN LFGPPGIIFF DRNGHEIGRV VGYQAADTFL RSLDRAAVPT V
|
| |