| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6625 |
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| Symbol | |
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| ID | 4308504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008385 |
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| Strand | - |
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| Start bp | 32885 |
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| End bp | 34603 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638147764 |
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| Product | TrbL/VirB6 plasmid conjugal transfer protein |
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| Protein accession | YP_771702 |
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| Protein GI | 115345517 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATGC CAGCCAATCT AAAAACCCTC GCCCTGCCGC TGTTCGTCTG GCTGGCGTTC
TTCGCGGTCG ATGCCCACGC GGCCATCGAC AACGCCGGCG TGTTCGATAG CGTGCTGGAT
CGCTACCAGG CCGCCGCGAG CGGCTGGGCC GGTGTCATCA CCACGGCCGC AACCTGGCTC
TTCTGGACGC TGGTTGTGAT CTCGATGGTC TGGACGTTCG GCATGATGGC CTTGCGCAAG
GCCGACATTG GCGAGTTCTT CGCGGAGTTC GTCCGCTTCA CGATCTTTAC CGGCTTCTTC
TGGTGGGCGC TGACCAACGG CCCTAACTTC GCCTCGTCCA TCTATGCGTC GTTGCGGCAG
CTCGCCGGCA ACGCGACGGG CCTGGGCAAT GCTCTGTCGC CCTCGGGCAT CGTGGACGTG
GGCTTTGCGA TCTTCGACAA GGTGATGGAT CAGTCCTCGG TGTGGTCGCC GGTGGACAGC
ATGGCCGGCA TCCTCATGGC CGTGGCGATC CTGGTCATCC TGGCCCTGGT CGGTGTGAAT
ATGCTTCTGC TGCTCGCGTC GGGCTGGGTG CTCGCCTACG GCGGCGTGTT CTTCCTCGGC
TTCGGTGGTT CGCGCTGGAC TTCCGACATG GCGATCAACT ACTACAAGGT CGTCCTGGGC
GTGGCCGCGC AGCTCTTCGC AATGGTGCTC CTGGTGGGCA TCGGCAAGAC CTTCCTCGAT
GACTACTACT CGCGCATGAG CGCCGGCATC AGCCTCAAGG AAATGGGCGT GATGCTGATC
GTCGTCATCA TCCTCTTGGC GTTGGTCAAC AAGATTCCGC CGCTCATCGC CGGGATCATC
ACCGGCGCGA GCGTGGGCGG TGCCGGCATC GGCCAGTTCG GTGCAGGCGC TGCGTTGGGT
GCCGCAGGCA TGGCAGCAGC AGCGGCCGCG ACCGGCGGCG CCGCTCTGGC CGCCGGCGCA
GCCTCGGCCG CCGGTGGTGC CTCTGCCGTC ATGGCCGCCT TCTCGAAGGC CAATGAGAAC
GTGTCGGCAG GCACGGACGT TATGTCGGCC TTCTCGGGCG GCGGCAGCTC GGGCGGCGGT
GCGGGCGGCG GCGGCGACGC CGGCACCGGC AGCACGCCCT TCGCTCAGGC TGCGGGCTTT
AGCGGCAGCT CCGGCGGTGG CTCTTCGTCG GGTGGCGGCA GCCCCTCGAC CGGCAGCAGC
TCGGGCAGCT CGAAGGGCGG CGATAAGGGC GGCGGCAAAG CCGACGCCGG CGGCCAGGGC
AGCAGCTCGA CGGCCAGCAC CGGCAGCAGT GCCGACAAGG CCGCCAAGAA CGAACCCAAG
CCCGCCGGCG GGGCAGGGCA AGGGCAGCAG GCCGCACCGG GCAGCACCGG CCCCGGCTTG
CTCGCATCGG CCGCATCGGC CCTCGGCACG GCCGGCCGCA TCGCCGCCGA CGCCGGCGCG
AACTTGGCGA AGGGAACCGC CGATGTTGCC AAGGCCAAAG CCGCGAGCCT GCGCGAAGCC
GCAGCCGAGC GGATCGCCGA CACCACTGGC GGAAAGATCG CCGCCGCGAT CAAGGCGCAA
GGAAGCGGCA CGGCCGAGAA CATCGACGTG CCCGACCAGC AGCCCGCGCC GAGCTTCGGC
GACAACAGCC TGGCAGGCGG CCCCGCCGAT GCCGATCCCG AGTCCGAAGT AGCTGCGTTC
GCCAACCGCG AGCAAGGCCG CGACGGCACA ACTGCGTAA
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| Protein sequence | MRMPANLKTL ALPLFVWLAF FAVDAHAAID NAGVFDSVLD RYQAAASGWA GVITTAATWL
FWTLVVISMV WTFGMMALRK ADIGEFFAEF VRFTIFTGFF WWALTNGPNF ASSIYASLRQ
LAGNATGLGN ALSPSGIVDV GFAIFDKVMD QSSVWSPVDS MAGILMAVAI LVILALVGVN
MLLLLASGWV LAYGGVFFLG FGGSRWTSDM AINYYKVVLG VAAQLFAMVL LVGIGKTFLD
DYYSRMSAGI SLKEMGVMLI VVIILLALVN KIPPLIAGII TGASVGGAGI GQFGAGAALG
AAGMAAAAAA TGGAALAAGA ASAAGGASAV MAAFSKANEN VSAGTDVMSA FSGGGSSGGG
AGGGGDAGTG STPFAQAAGF SGSSGGGSSS GGGSPSTGSS SGSSKGGDKG GGKADAGGQG
SSSTASTGSS ADKAAKNEPK PAGGAGQGQQ AAPGSTGPGL LASAASALGT AGRIAADAGA
NLAKGTADVA KAKAASLREA AAERIADTTG GKIAAAIKAQ GSGTAENIDV PDQQPAPSFG
DNSLAGGPAD ADPESEVAAF ANREQGRDGT TA
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