| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_3052 |
|---|
| Symbol | |
|---|
| ID | 4284716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 3338210 |
|---|
| End bp | 3339070 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638142548 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_758271 |
|---|
| Protein GI | 114571591 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.995859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC CGCTTTCCGC TGATCGCACT CGCGCCAACC AGGCCGAGAT CCGCGCTTTC
TGGCTGGCCT GCCAGTTTGC CTGGCTGACC TTGTTCGTGT TCTGGGTCAT TGCCTCCACA
TCGATCGACA CCGAATTCGC CCGAGACGGG CGGGCGGGGC CGCCCTTCTT CTCCTGGGTG
ACCGAAGGGT CCAGCGTGAT CATGACCGCC CTTATGGCCC CGGCCATGAT GTGGCTGGGC
CTGCGCGCGC CGCTGGAACC GGGGCGCTGG ATGAGCTCGC TGCCCTGGCA TGTCGCGGGA
TTTCTTGGCT ATACGAGCCT GCACGTGCTC GGCATGGTCC TGATCCGCGA AGGCGTATGG
GCCTTTGGCT ATGGCGGCGA TTACGAGTTT TTCCATGACT CGCCCTGGCG TGAGATCGTC
TATGAGGCCC GCAAGGATAT CGGCACCTAT GCCGGCTATC AGATCATCAT GGCGGTCTCG
CTCGCCTTGC AGATGCGCCA GCTGGAAGTC GATGTCGCCC GGGCCGAGGC GCGGCAGAGC
CACCGGCTGA CTCTCAAATG CGGTGGCCGG ACCCTGCGGA TCGCCGCGGA CGAGTTCCGC
GCCGCGCAGG CCGCCGGAAA CTATGTCGAA ATCGGCCTTG CCAGCGGCAG GCACCTCGCC
AGGTCCACGC TCACCGAGCT GGAAAAACAA CTGGGGGAGG CCGGAGTCGA TGCGGTCAGG
GTGCATCGAT CCTGGTTGGT CAACCGGGGT GCCATTCGCG AGATTGCGCC AACCGGCGAA
GGTGACGTCA CGATCACGCT CGATACCGGG ACACAGATAC CCGGCAGTCG CCGCTACCGG
GCCAGGCTGG ACACCGACTG A
|
|---|
| Protein sequence | MTEPLSADRT RANQAEIRAF WLACQFAWLT LFVFWVIAST SIDTEFARDG RAGPPFFSWV
TEGSSVIMTA LMAPAMMWLG LRAPLEPGRW MSSLPWHVAG FLGYTSLHVL GMVLIREGVW
AFGYGGDYEF FHDSPWREIV YEARKDIGTY AGYQIIMAVS LALQMRQLEV DVARAEARQS
HRLTLKCGGR TLRIAADEFR AAQAAGNYVE IGLASGRHLA RSTLTELEKQ LGEAGVDAVR
VHRSWLVNRG AIREIAPTGE GDVTITLDTG TQIPGSRRYR ARLDTD
|
|---|
| |