| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2735 |
|---|
| Symbol | |
|---|
| ID | 4286048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 3007415 |
|---|
| End bp | 3010180 |
|---|
| Gene Length | 2766 bp |
|---|
| Protein Length | 921 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638142234 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_757959 |
|---|
| Protein GI | 114571279 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01782] TonB-dependent receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.692321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.69232 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAATC AACGCACCAC GCGTCGTGAC TGGCTGATGG CCAGTGCGGC ATCCACATTG
GCCCTGTCCA TGACCTTGGC CGCACCGGCT TCGGCACAGG ACGATGCTGA CGACCAGGCG
AGTGATGTCA TCACCGTCAC GGGCTTCCGC AGCGCCATCG AGAACTCGAT CGCGGTCAAG
CGGGAATCGA CGTCCATCGT CGAGGCCATC TCCGCTGAAG ATATCGGGCG CCTGCCCGAC
AACTCGATCG CCGAGTCATT GGCCCGTCTG CCGGGTCTTG CAGCCCAGCG CCTTCGCGGA
CGTGCCCAGG TTATTTCGGT TCGCGGTCTT GGCCCGGATT TCACAACCGC TCTTCTCAAC
GGTCGTGAGC AGGTCACCGC CGGCGACAAT CGTGGCGTTG AATTCGACCA GTATCCGTCC
GAGCTTCTCA GTTCTGTCGT TGTCTACAAG ACGCCGGACG CGCAGCTGGT CGGCCAAGGC
CTGGCTGGCA CCGCCGACCT GCGCACGGTG CGCCCGCTCG ACAGAGACGA GCAGACCATC
GCCCTGTCGG CCCGCTATGA GTGGAATAAC TACGGCGCCT TGAATGCTGG TTCCGAAGAC
AGCGGTCACC GCCTGACCGG TTTCTACATC GATCAGTTCG CCGATGACAC GATCGGCCTG
GCCATTGGCT TTGCCACCCA GTCCTCGCCG ACGCAAAGCG AACGCTGGGA TGCCTGGGGC
TACCCCACCG TCGGCGCTGG CGACCTGCTT CTGGGCGGCG CCAAGCCTTA TGTCGAGAGC
CGCGAGCTCG AGCGTACCGC CTTCGTCGGC ACGCTGGAAT TCGAGCCGAA TGCGAACTCC
CACACCACGA TCGACGCCTT CTATTCGCAG TTTGAAGATA CCGGTATCCT CCGCGGCATC
GAGCTGCCCC TGGCCTGGAG TGGCGCGTCC CTGCAGCCGG GCTACACCAC CGAAGATGGC
CTGGTTACCG CGGGTACGTT CTCCGGCGTG CAAGGCGTGG TTCGCAATGA CACTCGCTTC
CGTGAAGCCG ATGTCATGTC TTTCGGCATC AATCACGAAC AGACGCTCAA TGAGCACTGG
ACCGGGTCGC TCGACCTTTC CTACTCAAGC GTCTCCCGCG ACGACACGGA TTATGAATCC
TATGCCGGTA CCGGCTCCGG CTACGGAACC GGCGCATCCG ACACGATGGC CTTCGAACTT
GGCGGCAGCG GCGGCTTTGT CTTCGGTTCC AGCCTGGATT ATGCCGATCC GAGCCTGATG
CTGCTGACCG ATCCGCAGGG TTGGGGTCAG GTCGGTTTCA TCAAGCGTCC GTCGACCGAG
GATACGCTGA CGGCTCTGCG CGTCGAAGCC GAGCGGGAAA TTTCCCAAGG CTTCTTCTCG
AGCGTCGAGG TGGGCCTGTA CACGACGGAC CGCGAGAAAA CCAAGCGTTC GGTCGAGGAC
TTCATCGATC TCGCCAATGG CGGCGCCACC AATACAACGG CAATCCCGTC CAACCTGCTA
CTTGAGCCGA CCAGCCTCGA CTTTATCGGC ATTGCCGGCA TGGTCAGCTA TGACCCGATC
TCGCTCCTGA ACAGCGGCGT CTACTCCTTG CGCCCGAACC TCAATGCCGA CGTCCTGACC
AAATCCTGGG ACGTGGAAGA GCAGCAAGTG ATCGGTTACC TCCAGGCCAA TGTGGATTCC
TTCCTTGGCG ACACGCCGGT CCGCGGCAAT TTCGGTCTCC AGATCGTGCA CACCGAGCAA
TCCTCCACCG GCCCGCGCGC CGGCCAGGGC GCCCTGCTGA GCTATACGGA ATCGGAGAGC
TACTCGCACA TCCTGCCGAG TGCCAACTTC TCCTTTGAAG TCGCCGAAAA CACCTTTGTC
CGCGTCGGTG CTGCGCGCAC CATGGCCCGC CCGCGTATGG ACGAGCTTCG GGCTTCCCAG
GAAATCGGCA TCAATAATCA GGTCTGCACG ACCAATGATG GCACCGGTAA TCCGGCCTTC
AATGCAGCCA ATTACGATAT CGCAGGCGGC CAGTCCTGCC TGACGGTTTC GGGTGGCTCA
CCACGTCTGC GTCCGGTCAC CGCCGACGCG ATTGACCTGT CGGTCGAACA TTATTTCGCG
GACGGCGGCG GTTATATCTC GGCCGCCATC TTCAACAAGG ATATCGACAA TTACGTGTTC
GGTTCCTCGG CCCGCCAGAT CGACATGACG GATGCCGCCA ACGCGATCTT TGACAGCGCC
TTCATTGCTG CCAACCCGGA CATCACGACC GGCATTCTCT ACGAACCGGT CAATACCGAT
GGTGGCTATA TCCGCGGTAT CGAAGTGGCC ACCAACATCC CGGGCGACGC GGTTGCTCCG
TGGCTTGACG GCTTCGGCCT GCTGGCCAGC TACTCCTATA CGGAGAGCGA GGTCCAGCCG
GACCCGAACC AGGCACCGAT CGCAATTCCG GGCCTGTCTG AGAATGTCGG CAACCTGACT
GTCTATTACG AGCGCGGCGG ATTTGAAGCC CGTGTCTCGA ACCGCTGGCG TTCGGAATTC
CTTGGTGAAG TCACTGGCTT CGGTGCCAAC CGTGAATTCC GTAACATCGA AGCCGAGTCG
GTCATTGATG CGCAGATCGG ATATGAATTC GGCCCTGGTC AGTTTGAGGG TCTGTCCATC
TTCGCGCAGG GTAATAACCT GACCGATGAA GCCTTCGTCA GCTATCTGAA CGACGACCCG
CGCCAAGTGA AGGACTATCA GCAATATGGC GCGACCTACC TCATCGGCTT CAGCTGGCGC
CGATAG
|
|---|
| Protein sequence | MINQRTTRRD WLMASAASTL ALSMTLAAPA SAQDDADDQA SDVITVTGFR SAIENSIAVK
RESTSIVEAI SAEDIGRLPD NSIAESLARL PGLAAQRLRG RAQVISVRGL GPDFTTALLN
GREQVTAGDN RGVEFDQYPS ELLSSVVVYK TPDAQLVGQG LAGTADLRTV RPLDRDEQTI
ALSARYEWNN YGALNAGSED SGHRLTGFYI DQFADDTIGL AIGFATQSSP TQSERWDAWG
YPTVGAGDLL LGGAKPYVES RELERTAFVG TLEFEPNANS HTTIDAFYSQ FEDTGILRGI
ELPLAWSGAS LQPGYTTEDG LVTAGTFSGV QGVVRNDTRF READVMSFGI NHEQTLNEHW
TGSLDLSYSS VSRDDTDYES YAGTGSGYGT GASDTMAFEL GGSGGFVFGS SLDYADPSLM
LLTDPQGWGQ VGFIKRPSTE DTLTALRVEA EREISQGFFS SVEVGLYTTD REKTKRSVED
FIDLANGGAT NTTAIPSNLL LEPTSLDFIG IAGMVSYDPI SLLNSGVYSL RPNLNADVLT
KSWDVEEQQV IGYLQANVDS FLGDTPVRGN FGLQIVHTEQ SSTGPRAGQG ALLSYTESES
YSHILPSANF SFEVAENTFV RVGAARTMAR PRMDELRASQ EIGINNQVCT TNDGTGNPAF
NAANYDIAGG QSCLTVSGGS PRLRPVTADA IDLSVEHYFA DGGGYISAAI FNKDIDNYVF
GSSARQIDMT DAANAIFDSA FIAANPDITT GILYEPVNTD GGYIRGIEVA TNIPGDAVAP
WLDGFGLLAS YSYTESEVQP DPNQAPIAIP GLSENVGNLT VYYERGGFEA RVSNRWRSEF
LGEVTGFGAN REFRNIEAES VIDAQIGYEF GPGQFEGLSI FAQGNNLTDE AFVSYLNDDP
RQVKDYQQYG ATYLIGFSWR R
|
|---|
| |