| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2660 |
|---|
| Symbol | |
|---|
| ID | 4286026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 2902975 |
|---|
| End bp | 2905914 |
|---|
| Gene Length | 2940 bp |
|---|
| Protein Length | 979 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638142159 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_757884 |
|---|
| Protein GI | 114571204 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.436942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTTA AAGGTCTCAT GCGTGCGAGC AGCGCGCTGA CAGCCCTTGC CATGGTGGCA
GGCCTGTCGG CGACGTCATA CGCGCAAGAC GATGTGATCA TCGTCACGGG TTCCGTCATT
CGCGGAACCC CCGAGGACGC GGCCCTGCCG GTCGACGTCC TGTCTGCGGA AGAACTGGCC
CGTCTGGGCA ACCCGTCGCC GGTCGAGCTG ATCAAGGCCC TGCCGGTCTC GAGCGGTGTC
ATCGGGGACA CAAACCAGTT CGACAGCCGG TCGCAAGCCA CCGAAGGCAT GGCGTCGGTC
AACCTGCGTG GCCTCAGCCC GCAGCGCACG CTTGTCTTGT TGAACAATCG TCGACTGGTG
CCGGCGGGGA CGGGGGTCCC GTTTGTCGAT CTGAACCTGT TGCCAGCAGC GGCGATCGGG
CGGATCGAAA TACTCAAGGA CGGCGCGGCC GCGATTTACG GATCCGACGC CATTGGCGGG
GTGGTCAATT TCATTACCCG CTCTGACCAG GAAGGTTTCC GTTTCGGCGG TGATTATTCC
TTCATTTCCG ACACGGATGG CGATTACACG CTCCAGGGCA GCTTCGGTCA CCAGGGCGAT
AATTTCCGCT TGATGGTGGC GGCCGGATAT CAGCACCGTT CAGAGTTGTT GGCGATGGAT
CGCGACTTTG CGGTGCAGGA CTTCGAAGCC AACCCGGAAG GCGGCTGGAC CGGCGGCGGC
AATCCCGCAA CCTTCCTGCC ATTGGGCATC ATTCCCGGTG TGGGCGTGGC TCCGATTGGT
GGCCTTCGGG CTGACCCGGA TTGTGCTGCT CTCGGTGGCT TCGTGACGGC TGCCAACTGG
TGCCGGACCC AATACACGGG TTTCGATGCA CTGGTTGAGG AAGAGGACCG CTACCAGATC
TGGGGCGAGA TGGGCATCGA TCTCACCGAC AATGTAGAGT GGGAAATCAG CCTCCTCTAT
GGGTCAGACG AGGTTCCGCA CTACCGGACC TCGCCGATGT ATCTGCTGAC CCAGGCACCC
TCTGCCAGCG TTGGCGGATC GCCGAGTGGT TTCATCGTTC CTGGCAATAA TCCGGGCTTC
ATCCAGATGG TCACGGAAAA CCCCGGCGTC GTGCCGGCCG GAACGATTGC GGCGCTGTTC
CCGACCTTGC TGTTCCGCCC GCTTCTCGCA GGCGGCAATC CGGCCTTCGC CGGACGCCCG
GATGATCTGG GATCGGCAGT CGGATTGCGC GAGAATGAGA GTTTCCGGAT TTCGACCGGG
CTGAATGGCG AGCTGAACGA TACGACCTCG TTCGACGTCA ATCTCACCTA TCATCGCTAT
GAGCGGTTCT ATGATGGCTA TGACAGCTTC GGTGACCGGG TCCAGCTGGC GCTGGGTGGC
CTGGGCGGAC CGAATTGTAA CCCGGCCACC GGCACGCCGG GCGTCGGCGA TTGCATGTGG
TACAACCCGT TCGGCAACCA GGCGCCGGCC AATGCCGTCA CCGGGGTCGA GCGGCCGGGT
GCCGAGCCTA ACCAGAACAG TGCCGAACTG ATCAACTGGT TCTTTGTGCG CGGTTCCACG
CGGCTGGAAA CCGAATTGTT CGTCGCTGAA GCTACGTTGA GCGGTGAAAC CGGTTGGGAG
CTGGCGGGTG GTTCCGTCCT CTACGGTTTC GGTGGTCAGT ACCGCCGGGA AACCTACTCG
GCGGCCTATG GCGACAACAA CAATATTGCC GTCAATCCCT GTCGTGACAC GCCTGTCTCG
GGCAATACGA CCTGTGATCC GCAAACCGGT GCCTGGGCCT TCCTCGGGTC CAATGCCGAC
AGTGACGCGG ATGGAGATGT CTATGCCATC TTCGGCGAGC TTCAATTACC GGTGACGGAC
GACTTCAATG TCCAGCTGGC GGCGCGCTAC GAGGACTATG GCGGGCAGAC CGGGTCGACC
TTTGACCCGA AGGTCACAGC TCGCTGGCAG ATCTCGGAGG GCTTCGCCCT GCGTGGCTCC
GCCGGAACGA CTTTCCGTGG GCCACCTGCC CAACAGACGG TCAACTCGAA CGTCACCTCG
CTGCAGGTGA TTGCCTCAAG CTTCCGGCCT GTCGACGTCT TTGGCAATCC GGGGTTGGCG
CCGGAATCGG CAACCAACTA CTCCATCGGC GCCTTGTTCT CGACGGATAA TTTCACTGCC
AGTGTGGACT ATTTCCGCTA CGAGATTCAG GACACCATCA ATACCGAACC ACTCTCGGGC
ATGGTCGCCA CACTGTTCGC CGATCCGGCG AATTGTACCG ATCCGACCTT CGATGGCCTG
CGTGAACGCT TCCAGTTCAA TGATGGCGGA GGCGTGGCTG GTGCCGGTAC TTGCGCGGCG
GCAAACATCG CGCGGGTGCG GACCGAAGTG GTCAATGGTG GTGATCTCAC CAGCTCGGGC
GTCGACTTCA TCCTCAACTA TGATTTCGGC GATGTGATGG GCGGCACGCT CAATACCGGA
CTGACCGCCA CCTACATGCT TGGCAATGAG TTGGGTGACG AGACGGTTGA GGGCGTCGTG
GTCCAGCAGG GCTTCGACGG TGTCGGCTTC ATGAACTTCC AGACCACCGC CTATCCGGTG
CCTGAATGGA AGGCACGTGG CTTCTTCGAG TACACCGTCG GGAATATCGA TACCCGGCTG
ACCTTCACCT ATACCGACAG CTATCGGGAT CAGCGAGCCG ATCTGGGGAC CGGGCCATTT
GCCCCGAACC CCTACATCGT CGGCAATCCG ACCCTGATGC AGGGTGCGAC GATCGACAGC
CAGCTGACGA CCGACTTCAA CCTGCTCTAT CACTTTGGTG ATGCAACGAC CTTCTCGTTC
ACGGCGATCA ACCTGACCGA TGAGGATCCG AGCTTCTCCA GGCAGGACTA CAATTACGAC
CCCTTCACCG GGAACCCGGT CGGTCGTGTG ATCCGGGTCG GCTTCAACAC CGAATTCTGA
|
|---|
| Protein sequence | MTVKGLMRAS SALTALAMVA GLSATSYAQD DVIIVTGSVI RGTPEDAALP VDVLSAEELA
RLGNPSPVEL IKALPVSSGV IGDTNQFDSR SQATEGMASV NLRGLSPQRT LVLLNNRRLV
PAGTGVPFVD LNLLPAAAIG RIEILKDGAA AIYGSDAIGG VVNFITRSDQ EGFRFGGDYS
FISDTDGDYT LQGSFGHQGD NFRLMVAAGY QHRSELLAMD RDFAVQDFEA NPEGGWTGGG
NPATFLPLGI IPGVGVAPIG GLRADPDCAA LGGFVTAANW CRTQYTGFDA LVEEEDRYQI
WGEMGIDLTD NVEWEISLLY GSDEVPHYRT SPMYLLTQAP SASVGGSPSG FIVPGNNPGF
IQMVTENPGV VPAGTIAALF PTLLFRPLLA GGNPAFAGRP DDLGSAVGLR ENESFRISTG
LNGELNDTTS FDVNLTYHRY ERFYDGYDSF GDRVQLALGG LGGPNCNPAT GTPGVGDCMW
YNPFGNQAPA NAVTGVERPG AEPNQNSAEL INWFFVRGST RLETELFVAE ATLSGETGWE
LAGGSVLYGF GGQYRRETYS AAYGDNNNIA VNPCRDTPVS GNTTCDPQTG AWAFLGSNAD
SDADGDVYAI FGELQLPVTD DFNVQLAARY EDYGGQTGST FDPKVTARWQ ISEGFALRGS
AGTTFRGPPA QQTVNSNVTS LQVIASSFRP VDVFGNPGLA PESATNYSIG ALFSTDNFTA
SVDYFRYEIQ DTINTEPLSG MVATLFADPA NCTDPTFDGL RERFQFNDGG GVAGAGTCAA
ANIARVRTEV VNGGDLTSSG VDFILNYDFG DVMGGTLNTG LTATYMLGNE LGDETVEGVV
VQQGFDGVGF MNFQTTAYPV PEWKARGFFE YTVGNIDTRL TFTYTDSYRD QRADLGTGPF
APNPYIVGNP TLMQGATIDS QLTTDFNLLY HFGDATTFSF TAINLTDEDP SFSRQDYNYD
PFTGNPVGRV IRVGFNTEF
|
|---|
| |