Gene Mmar10_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2454 
Symbol 
ID4285436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2669857 
End bp2671008 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content62% 
IMG OID638141958 
ProductLpsE protein 
Protein accessionYP_757684 
Protein GI114571004 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCCT CGATCCGAAA GGTTGCCGCG ACCCGGACCG GCCAGCCCAC GGTCGTCGGA 
ATATTTCGGG CTGCGAGTGG GATCGGCAGC GGTGCCCGTG TGATATTCCG CGCCTTGCGT
GCCAATGGTT ATAGCCCTGC ACTAATAGAC CTGACCGACC GTCTGGCACC GGACCAGCCG
CACTTCGATT GGTCGCCAGG CGGTGCGCTT CCCGATGATG ACGGTCGGGG ACCGGTTATC
CTCCACCTGA ATCCGCCCGA AGTGCCTTTC GCGCTATCTA TGCTCGGAGC TGAACGGTTG
CGGCATCGCT ATCGGGTCGG CATGTGGGCG TGGGAGCTGG AGCGCATGCC GTCAGACTGG
CAACGCGAGG TCAGCTACTT CAACGAAATA TGGGCGCCGA GCAATTTCAC GGCCGATGCC
ATACGGGCCG GCGCGCCGGG TGCGGATGTA TGGTGCGTTC CTTATGCGCT CGAAGCCGAG
CCGTTCGCCG CCGCCGATGG CGGTCGCTGG CGGCGCCAGC TGGCTCCCAA TGGTGAGCGG
ATCGTGTTCT GTGCCTTCGA CGCGCGATCA TCCATGTCTC GCAAGAACCC GGCTGCAGCC
ATTGAAATTT TTAGAACTGC CCTCGGTGAG TGCACTGATG CGTGCCTCGT TCTGAAGGTC
TCCAACTCAA GCTGGGATGG TGCCAGTCGC CATGAGTTGA TGGCACGGAT CGGCGGCGAC
TCCCGCATCC GTCTCCTGAC CGGCACGCTC GACGGCGCGG AAATGAACAG CTTGATCGCG
GCGGCTGATG TCTATCTCTC GCCGCATCGC AGTGAAGGGT TCGGCTTCAT GCTGGTGAAG
TCCCTGCTGG CGGGAGTCGA TGTCATGATG ACCGGCTGGT CGGGGAATGC AGATTTTTGC
GACCTGCCTG GCACGCACGT GATCGACAGC CATCTCGTTC CGGTGCATGA CGCGTCGGGG
GTTTATGGCC GCCGTGGCCG TTGGGCCGAA CCTAACATCG CCATGGCCGG AAGAACGCTG
AAAGCGTTGC TGGCGGCGCC GCGTGATGCG CAACGCCGTG CCAGCATTGC CGAAATCGCG
GCGACCCGAT TCTCTCCAGA CGGTTGGGGG CAGCGATTGA GCGCGCGTTT CAAAGCCCAT
ACATTACTGT GA
 
Protein sequence
MLASIRKVAA TRTGQPTVVG IFRAASGIGS GARVIFRALR ANGYSPALID LTDRLAPDQP 
HFDWSPGGAL PDDDGRGPVI LHLNPPEVPF ALSMLGAERL RHRYRVGMWA WELERMPSDW
QREVSYFNEI WAPSNFTADA IRAGAPGADV WCVPYALEAE PFAAADGGRW RRQLAPNGER
IVFCAFDARS SMSRKNPAAA IEIFRTALGE CTDACLVLKV SNSSWDGASR HELMARIGGD
SRIRLLTGTL DGAEMNSLIA AADVYLSPHR SEGFGFMLVK SLLAGVDVMM TGWSGNADFC
DLPGTHVIDS HLVPVHDASG VYGRRGRWAE PNIAMAGRTL KALLAAPRDA QRRASIAEIA
ATRFSPDGWG QRLSARFKAH TLL