| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2416 |
|---|
| Symbol | |
|---|
| ID | 4285606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 2628654 |
|---|
| End bp | 2630015 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638141920 |
|---|
| Product | TolB domain-containing protein |
|---|
| Protein accession | YP_757646 |
|---|
| Protein GI | 114570966 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
|---|
| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAA TTTTTGTCCT GTTCGCTGCG CTCCTCGCCC TGATTGGCTG GTCCGCCGCC
TCCGATGCCC AGGAACCGCT GCGGGTCGAT GTGACCCAGG GCAATCTCGA TCCGATGCCG
ATCGCCGTGC CTGATTTTGT GGGCGCGTCG GACGAGGCCC TGCGCCGCGG CGCCGACATC
ACCCGCGTGG TCGCCAATGA CCTGGCCAGC TCCGGCCTGT TCGCGCCGGT CGACCAGGAC
GCCTTCATCG AGGACATCGC CAATATCGAC CTGCGTCCGC GCTTTTCGGA TTGGCGGGTG
ATCAATGCCG ATGCGCTTCT GGTCGGCAGC GTCACCATCC AGGAGGATGG CCGTCTGGTC
GTCGGTTTCC GCCTTTGGGA CACCCGCCTC GAGGAACAGC TTCTGGGCCT GCAATACCGC
ACCGCGCCGG AAAACTGGCG CCGGGTGGCC CATCGCCTGG CCGATGCCGT CTATGAACGC
CTGACCGGCG AGACCGGCTA TTTCAACACC CGCATCGTCT ATGTCTCGGA AGGTCGCGGC
ATCGAGGGCG AGCCGATCCG CCAGCTCGCT TTGATGGACC AGGACGGTGC CAACCCGTCC
TTCCTCACCG ACCGTTCCTA CATGGCCCTG TTGCCGAACT ATTCGCCCAG CGCCCAGGAA
ATCACCTATG TGTCCTTCCT CGACGGCCAG GCGACGACCT ATCTCTACAA TCTCGAGACC
GGTCGACAGG AGGCCCTGTT CGCCTCTGGT GGTGCCGGCG CTGCCAGCCA GGTCGATCCG
GACGGGCAGA GCCTGTCAGC GCGTTTCTCG CCGGATGGCT CGGAACTGGC GGTGTCGATC
GAGACACGGT CAGGACACGA CATTCACTTG TTCGACCTGC AGACCCGCAA TCTCCAGCGC
CTGACCCAGC ACCCGGCTGA TGATGTCGAG CCGTCCTTCG CACCGGATGG CGAGCGGATT
GTCTTTTCCT CGGCCCGCGG CGGTGGCTCG CAACTCTATG TGATGAACCG CGATGGCAGC
GACGTTCAGC GCATTACCTT CGGATCCGGC CGCTATACGA CACCCGTCTG GTCGCCGCGC
GGCGATCTGA TTGCCTTCAC CAAACAGGTT GGCGGCCAGT TTTCGCTGGG CGTGGTCCGT
GCGGATGGCT CTGGTATCGA ACGCATCCTT TTTGAAGGCT ACTTCGTTGA TACCCCCGCC
TGGTCGCCGA ATGGACGCGT TTTGTTGTTC ACTCGGGGCG AGCAACGCGC CAATGGTACC
CGATATGAAA TCTGGAGCGT GGACCTTGCC GGTTTCAACC TGCGGCGGCT GGCAACAGGC
GGAATGGCGT CCGACCCGGC ATGGTCGCCC TTGATTGAGT GA
|
|---|
| Protein sequence | MTRIFVLFAA LLALIGWSAA SDAQEPLRVD VTQGNLDPMP IAVPDFVGAS DEALRRGADI
TRVVANDLAS SGLFAPVDQD AFIEDIANID LRPRFSDWRV INADALLVGS VTIQEDGRLV
VGFRLWDTRL EEQLLGLQYR TAPENWRRVA HRLADAVYER LTGETGYFNT RIVYVSEGRG
IEGEPIRQLA LMDQDGANPS FLTDRSYMAL LPNYSPSAQE ITYVSFLDGQ ATTYLYNLET
GRQEALFASG GAGAASQVDP DGQSLSARFS PDGSELAVSI ETRSGHDIHL FDLQTRNLQR
LTQHPADDVE PSFAPDGERI VFSSARGGGS QLYVMNRDGS DVQRITFGSG RYTTPVWSPR
GDLIAFTKQV GGQFSLGVVR ADGSGIERIL FEGYFVDTPA WSPNGRVLLF TRGEQRANGT
RYEIWSVDLA GFNLRRLATG GMASDPAWSP LIE
|
|---|
| |