Gene Mmar10_2390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2390 
Symbol 
ID4286522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2602575 
End bp2603486 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content64% 
IMG OID638141894 
Producthydroxymethylglutaryl-CoA lyase 
Protein accessionYP_757620 
Protein GI114570940 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.369833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA AGATTGAAAT CGTTGAAGTC GGACCACGGG ACGGGTTGCA GAATGATCCG 
GCGATGATGT CGACGGATAC CAAGATCGAG TTCATCGAGC GTCTGGTCGC GGCCGGGGTG
CGGCGCATGG AGGCGGCGAG CTTTGTCCAT CCCAAGCTGG TTCCGGCGAT GGCCGACAGT
GATGCTGTGA TGCAGCGCGT GCCGCGTCAG GACGGGGTGA AATATATCGG CCTGGCGCTC
AATGAGCGCG GCATGCGGCG GGCGCTGGAG AACGGCTGTG ACGAGGTCAA TTACGTGATG
GTCGCCTCGC CCGGCTTTGG TCTGAAGAAC CAGAACGCCA CGCCGGACGA GACCGCCGAC
CTGTTCGACC GGATTGCCGT GCTGGCCCAT GATGAGGGTG TGCCGGTCTC GGTGACGGTA
TCGGTGGCCT TTGGCGACCC GTTTGACGGC GAGGTCGACG CCAATGTCGT GGCTCAACTC
GCCGCCCGAG CAAAAGCGGC GGGCGCGGTC GAGTTCGCGA TGGGCGACAC GATCGGTGTG
GCCGATCCTT GGGCGGTTCG CCGGATGCTG GACCTTGTTC GCGCGCAAAG CGGTGACATG
AAAATCCGCA TGCATTTCCA CAACACGCGC AATACGGCCA TGGCCAATAT CTACGCTGCG
GTGGAAGCCG GCGTCGATGT GATCGACGCC TCGGTCGGCG GCATTGGCGG CTGTCCGTTC
GCCCCGGCGG CGACCGGCAA TGTGGCGACC GAGGATGTGG TCTACATGCT CGAACGCGGC
GGTTTCGAAA CCGGGCTCGA CCTCGGCAAG CTGATCGAAA CGGCCAAATG GCTGGAAAGC
GACGGGTTGA AACACCCGGT CGACAGCGCC CTGTCTAGAG CGGGCGGTTT TCCGACACCG
GCGCCGAGCT AG
 
Protein sequence
MTRKIEIVEV GPRDGLQNDP AMMSTDTKIE FIERLVAAGV RRMEAASFVH PKLVPAMADS 
DAVMQRVPRQ DGVKYIGLAL NERGMRRALE NGCDEVNYVM VASPGFGLKN QNATPDETAD
LFDRIAVLAH DEGVPVSVTV SVAFGDPFDG EVDANVVAQL AARAKAAGAV EFAMGDTIGV
ADPWAVRRML DLVRAQSGDM KIRMHFHNTR NTAMANIYAA VEAGVDVIDA SVGGIGGCPF
APAATGNVAT EDVVYMLERG GFETGLDLGK LIETAKWLES DGLKHPVDSA LSRAGGFPTP
APS