| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2237 |
|---|
| Symbol | |
|---|
| ID | 4284490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 2437076 |
|---|
| End bp | 2439190 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638141739 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_757467 |
|---|
| Protein GI | 114570787 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0278862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGGGA CTTTCATGAA CGGGGTGGCC GGTGTTTTCA TCGGCACACT CGCAAGCACG
GCCGCAGGCG CCATGCAGGA CGGACCAGCG TCCAACAATA CGGTACAGGT CCAGCGGCAG
GCGGGGGTCG CCGCATACCA GCCGACCTAT TTCACCGATT TCGCGCCAGT CACGGCGCTG
GACATGGTTT CACGCGTTCC CGGCTTCGGC CTGTCGAACG GTGATACCAG CCGCCGCGGC
CTGGGTGACA GCTTCGGCAA TCTCCTGATC AACGGACGCC GTCCATCGAA CAAGTCGCTC
TCATTGCAGA CCGTGCTGCA ACGCATCCCG GTCGACGATG TGGAGCGCAT CGAACTCATC
CAGGAAGCGC TGCCGCAATA CGACATGCGC GGTCATTCGC GCCTGGTGAA TGTGGTCCTG
CGTGAAGGCG CTGGCGTGTC CGGCTCCTGG GATGCCCGCC TGCAAGTGTC CGACAGCGGT
CGGCTCGGCC CGCGCCTGAT CGCCTCCTAT TCCCGCCCCG TCGGCCCGAC TGAAATGACC
TTCGGCATTG ATACCGGCAT GTCCGGCAAC CGCGCCCAGC GCCGCGAGTC GCGCCACGAT
GCCAATGGCG TCGAGTTCTC GCGCGGTTCC GACAATGACC AGCGTCAATA CGAAGAGTTT
GCGCCCAGCT GGTCGATGAA TTGGGACATT GATGACAATT CGCGTCTCCG GATGGATGCC
CGCGCAAATA TCTGGACCTG GACCCGCGTC CGCCATGCCG CCTATGACTC GGTTGCTGGC
AACACGCTGA CGCCGCAACG GCTCGAGCAC AACGAGACCG AAAACCATGG CAGCCTGTAT
TCCGGCACCC TGTCCTACCA ACGCGACCTG ACCGACCAGA TCTCGATCGA GACCATGCTG
CTGGCCACAC GGGATCGGTG GGAAGACGGG CCGGAAGCCT ATGAGAATTA TGACCCTGTC
GCCGGTTTCA CCGACTCGGT CATCGTCAGC GCCGGCGCTG AAATGGAAGA GACCGCCATA
CGGCAGACCC TGTCCTGGGA CCCCAATGAA CGTCATTCCC TTGAGATCGG CGGCGAACAC
GCAATCAATT CCCGCGACAC CCATCTGGCG TTGTCGGAAA ATGACGGCGT CACCATCACG
CCGATCAATC TGCCGGTCGC CGAAACCCGG GTCGAGGAAA GCCGTAGCGA AGTGTTTGCC
AACCATGTCT GGCAGATCAA TGATCGCGTC AGCCTGGAAA GCGGCCTGCG CTACGAATTC
TCGGAAATCG CCCAGACAGG TGATGCCCAG CAGACGCGCT CCTTCACCTA TCCCAAGCCC
AGCGTGACGC TGAACTACCG CTCCGATGAC CGCAACCGCT TCCGGTTCAC AGGCCGTCGT
GATGTCGACC AGCTGGAGTT CGGCAAGTTC GCCTCCTCGG TCGACGTGAC CGACAACAAC
TCCACCCTCG GCAATCCGGA CTATGTGCCG CAACGCACCT GGACGCTGGA AGGCGAATGG
GAGCGACGCT TCGGCGATGC CGGCTCCTTC TCGCTGCAGA TCGGCTATGA CTGGGTCGAG
GATCTCGACG GCTGGGTGTC CATCGTCACC CCGACCGGCG TGTTCGACGC ACCCGGCAAT
ATCGGTGACG GCACCAATCT GCGTGTCACC GGCAACATGA CCACGCCGCT GGATTCGTTG
GGCCTCAACA ATGCCGTGCT CGATATCTTC CTCGAGTGGT ACAATACCAA TGTCGAGGAT
CCGCTGACCG GCGAGGACCG GCACTGGTCG GGCTATCGTG AGTGGGAATT GTCGCTCGAT
TTCCGTCAGA CCTTCCCGCA GAGCCAGATG GCCTGGGGCT GGGACTATCA CTGGATCACC
GACGGCGAAG TCTTCCGATC GCGAGAATAC CAGCTGCACG ACAATACCGA TGGCGATCTG
GACATCTATG TCGAGACCAC CCGCTTCTTC GGCGTCACGC TCCGCGCCCA GGTCGATGGT
GTTTTCAATA CCGGTGATGA CCGTCAGCGC GTTTTCTATG ACGGGTCCCG GGCCAGCGGC
ATCATCAACG GGACTGACTA TCGGAACTTC ACGATGGGTC AGACCTATCA GATCAGCGCC
CGCAGCACGT TCTAG
|
|---|
| Protein sequence | MRGTFMNGVA GVFIGTLAST AAGAMQDGPA SNNTVQVQRQ AGVAAYQPTY FTDFAPVTAL
DMVSRVPGFG LSNGDTSRRG LGDSFGNLLI NGRRPSNKSL SLQTVLQRIP VDDVERIELI
QEALPQYDMR GHSRLVNVVL REGAGVSGSW DARLQVSDSG RLGPRLIASY SRPVGPTEMT
FGIDTGMSGN RAQRRESRHD ANGVEFSRGS DNDQRQYEEF APSWSMNWDI DDNSRLRMDA
RANIWTWTRV RHAAYDSVAG NTLTPQRLEH NETENHGSLY SGTLSYQRDL TDQISIETML
LATRDRWEDG PEAYENYDPV AGFTDSVIVS AGAEMEETAI RQTLSWDPNE RHSLEIGGEH
AINSRDTHLA LSENDGVTIT PINLPVAETR VEESRSEVFA NHVWQINDRV SLESGLRYEF
SEIAQTGDAQ QTRSFTYPKP SVTLNYRSDD RNRFRFTGRR DVDQLEFGKF ASSVDVTDNN
STLGNPDYVP QRTWTLEGEW ERRFGDAGSF SLQIGYDWVE DLDGWVSIVT PTGVFDAPGN
IGDGTNLRVT GNMTTPLDSL GLNNAVLDIF LEWYNTNVED PLTGEDRHWS GYREWELSLD
FRQTFPQSQM AWGWDYHWIT DGEVFRSREY QLHDNTDGDL DIYVETTRFF GVTLRAQVDG
VFNTGDDRQR VFYDGSRASG IINGTDYRNF TMGQTYQISA RSTF
|
|---|
| |