| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2147 |
|---|
| Symbol | |
|---|
| ID | 4284766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 2344283 |
|---|
| End bp | 2345176 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638141649 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_757377 |
|---|
| Protein GI | 114570697 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.576835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGG ACAAGCTGAA AACCTTTCAT GCGGCCGCAC AGGCCGGGTC CCTGACCAAG
GCCGCTGAAA TGCTGGGCCT GTCGCAGTCG GCGGTCAGCC GGCAGATCGC GGCGCTTGAA
AACGATCTCG GTGTGACCCT GTTCCACCGT CACGCGCGCG GGCTGATTCC GACCGAACCG
GGCAACCTCC TCTACGGCGC CGCCCATGAG ATCGCTTCCA AGGTCGCGAT TGCCGAAGCG
CATGTCCAGG ACGCCCGCGA CGAACCGTCC GGTGAGCTGA AGGTCACCGC CCCGACGGCG
CTGGGTGCGA TCTGGCTGGC CCCACGTCTG GCCGAATTCA ACACCGAATA TCCCAATATC
CGCATCCGCC TGATGCTCGA CGACCACGAG CTCGACCTGG CCGGCCTGGA AGCGGAAGTC
GGCATCAGGC CCTGGCCGTC GACACAGAAT GACCTGGTCC AGCGCAAGCT GCTGTCGGTG
CGCCAGCATC TGTATGCCAG CCACGACTAT GTCGAGCGCA AGGGCAGCCC GAAGGCGCCG
TCCGAACTCG ACGACCACGC CATCATCTAT TATGGCCCGC CACAACTGGC CCCGATCCCG
GGCCTCGACT GGGCCGCCAA GGCCGGTCGG GCCGACGGTG CCACGCCGCG CCCGGCCGTC
ATTGAGGTCA ATACGATCTA TGGCGTGATG AAAGCGGTCG AGGCCGGCAT GGGCATCGCC
GCCCTTCCGG ACTATGTGGC GCGCGAGAAT ACGAAGCTCG TCCGCGTTCT GCCCGACCTG
GACGGGCCGG ATTTCGAGGT CTTCTTTGTC TATCCGAGTG AGCTTCGAGG GTCCCGCCGC
ATCGTTGCCT TCCGCGATTT CCTGATCGAA CAAGCGCGTC GCTGGCAGAG CTAG
|
|---|
| Protein sequence | MDWDKLKTFH AAAQAGSLTK AAEMLGLSQS AVSRQIAALE NDLGVTLFHR HARGLIPTEP
GNLLYGAAHE IASKVAIAEA HVQDARDEPS GELKVTAPTA LGAIWLAPRL AEFNTEYPNI
RIRLMLDDHE LDLAGLEAEV GIRPWPSTQN DLVQRKLLSV RQHLYASHDY VERKGSPKAP
SELDDHAIIY YGPPQLAPIP GLDWAAKAGR ADGATPRPAV IEVNTIYGVM KAVEAGMGIA
ALPDYVAREN TKLVRVLPDL DGPDFEVFFV YPSELRGSRR IVAFRDFLIE QARRWQS
|
|---|
| |