| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2062 |
|---|
| Symbol | |
|---|
| ID | 4284298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 2239782 |
|---|
| End bp | 2241251 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638141563 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_757292 |
|---|
| Protein GI | 114570612 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.276214 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCTG GATGGCTCAA AGCGATCGCA GACCGGCGAC CCGGCCTGGA AAGTGTCAGC
CTGATGCTGC TGGCGCTCGT CTTTCTGCTG ACCGCGCCCC AGCCCCGGAT CGAGGCCCGC
ACGCCGCAGT CCGTACGCTA TGTCGATGCG GATGTCGGGT TGGCGGCCCT GCTCGCTGAT
CCTGCTGCGG GCGAACCGGT CGCCTATCGC GCAATCGGGC GTCCGGCAAC TGCGGGCTGG
CTGGTCTGGG ATGATGTGCC GATCTCCCGT GACGGACCGC CACCGGCGAT CAGCACGTCA
GGCCCCTTCT CGGCCACCTT GTGGTTCAAT GGCGAGAGGA TCGGTGAAAA AGGCCGTCCC
GGTGCGGACG CGGCCGAGGA GACAGCGGGG CCGATTGACA GCCTGTTTGC GGTGCCCGCC
GACCTGATCA GGCCCGACAG CAACCAGCTC GTGATGCGCC TGTCCAGCCA TCGGGCCGGC
TATACGCCCT ACAGCCTGGT CCAGTCCCTC TTCGTCCTGC CCTACAGTGC CGAAATCCGC
CGACCGGTGC GCTATTATCT GCCGCTGGTC AGTCTCGGCG CCGGCCTGGT GGCGCTGGCG
ATCGCCTTTG CGCTCCGGGC CCGGCGAACT GGCGACGGAA GAGGCCTCTG GCTGACGCTG
TCACTGGCAG GGCTGGCGCT GGCTGGCCTG GCCGAGATTT CCCGCGCGAT GATCAATTAT
CCCTATGACT GGCATCAGCC CCGCCAGGCG CTCAGCCTGT TCGGCCTGAC GGTCTTCGGG
GCCGCCCTGC TGCGCTTTGC CCAAGTGCGC TGGCCCGCAC CCGGCCAGGT CGCGCGGGCA
TGGATTGGTG TGACCGGCCT CGCCGCCCTG GCCAGCTTTG TCTTGATGAC CGGCTATGAC
GCCCGGTCTG CGGCCGTGAC CGCCTGCCTG ACCGGTTCGA CCGCCCTGTG GATGGCATGG
CGGGGCGACG CACAGGCCCG GATGCTGGCC ATCGGGATGG CAGCCATACC GGTCTATGCG
CTCTTTCTGC CGGCAGACCT GATCGATCGG GGCGTCCATG CGCTTGTGCT GGGACTGTTG
GCAATACCCG CCATTCGATG GCCCGACCTG CTTCAGCCAG AACCCGCGGC GGCGCCCGCC
ATCCTGGCAT TGCAGTCCAC CGGGCGCCTG ACCCGGCTGA GCTGCGCCGA GATTGCCCAT
CTCACCGCGG CAGGCAATTA CACCGAGGTC CGCACCCGGG ACGGCGTAAC GCATCTGGAC
AATCGCAATC TGAGTAGCCT GCTCGAGATC CTGCCGGGCG ACTTCATCCG CATTCACCGC
TCGCACGCGG TCAATCTCGA TCATGTCGAG GCGCTGACCA GCGAAGTGGG CAGTCGCTAC
CATCTGGTTC TCACCACCGG CGCGCAGATA CCCGTCAGCC GGCGGGAGGT CGCTGGCCTG
CGCGAACGCC TCGCCGGTCG CAAAGCCTGA
|
|---|
| Protein sequence | MMAGWLKAIA DRRPGLESVS LMLLALVFLL TAPQPRIEAR TPQSVRYVDA DVGLAALLAD
PAAGEPVAYR AIGRPATAGW LVWDDVPISR DGPPPAISTS GPFSATLWFN GERIGEKGRP
GADAAEETAG PIDSLFAVPA DLIRPDSNQL VMRLSSHRAG YTPYSLVQSL FVLPYSAEIR
RPVRYYLPLV SLGAGLVALA IAFALRARRT GDGRGLWLTL SLAGLALAGL AEISRAMINY
PYDWHQPRQA LSLFGLTVFG AALLRFAQVR WPAPGQVARA WIGVTGLAAL ASFVLMTGYD
ARSAAVTACL TGSTALWMAW RGDAQARMLA IGMAAIPVYA LFLPADLIDR GVHALVLGLL
AIPAIRWPDL LQPEPAAAPA ILALQSTGRL TRLSCAEIAH LTAAGNYTEV RTRDGVTHLD
NRNLSSLLEI LPGDFIRIHR SHAVNLDHVE ALTSEVGSRY HLVLTTGAQI PVSRREVAGL
RERLAGRKA
|
|---|
| |