Gene Mmar10_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2016 
Symbol 
ID4286709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2198575 
End bp2199579 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content65% 
IMG OID638141517 
Productrod shape-determining protein MreC 
Protein accessionYP_757246 
Protein GI114570566 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.149898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.741118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGTCGC GACGCTCAAC ACGACAGGAT GGTGAGCACG GCGTACGCTT TTCGCGGACG 
CTGTTCATTG CCCTTCTGGT CGTTTCCGGC GCGCTGATCG CCTTCGACCG GCCGGGGTCC
CGATCCGCGC CCTTCGCCAG TTTTCGCGCC GGCTTCACCG ATGTGTCGGC GCCTTTGCTC
GACCTCGCTG CCCAGCCCCT GCGCGGCATC AAGAATATCG GTCCCTATTG GCGCCGCCAG
GGCGAGCTCG CGGAAGAAAA TGCCAGCTTG CGCCAGCAAT TGATCGAGGC GCGTTACTGG
GAAGACCTCG CCTATCGCCA ACGTGACCGG ATCGAAGTTT ATGAAGAGGC GCTCGATATC
GAGAGCGCGG CGATCGAAGA CCGCATCGGG GCTTGGACCG TGGCCGATCC TCGCGGCCCC
TTCGTGCGCG CCCGGCTGAT CGGTCGCGGC AGCGATGCCG GTATCAGCGA CGGCTATCCG
GTGATCAACC TCTATGGCCT GGTCGGCCGG GTCTATGAAA CCGGGCGGCG GTCAGCGCGC
GTCCTCTTGC TGACAGATCT CAATTCCCGC GTTCCGGTCA TGGCCGACCG GTCGAATGCC
CGCGCCATCC TGGTGGGCGA CAATTCCGAG TTTCCGCGAC TGGACTATGT TGGCCGGGCG
CCTGACATCG AAGCCGGTGA CCGCATCGTC TCGTCCGGTG ATGACGGCAT CCTTCCCCGG
GGCCTGCCGA TCGGCGAGGC GGTTGCGACC CGCGATGGTG GCTGGCGTGT GCGGCTCTAT
TCCGACCAGG CGCCGGTCGA TTTCGTCTGG GTCTGGCCCT ATCGCCGTGT AACACCGCCC
GATCAGGAGG CTGCCGAAGA CCCTGTCGGG CCGGATCCTG CTATTGTCGA TAATGCTGTC
GCGCCTGTCC CTGCCGTCGA CACGCCTGTC GAAGGGGCCG AAGTCGATGA TGTCGCAACC
GATGATGTCG CTACCGAAGA CGATGAGCCG GAGGCAGGGC AATGA
 
Protein sequence
MASRRSTRQD GEHGVRFSRT LFIALLVVSG ALIAFDRPGS RSAPFASFRA GFTDVSAPLL 
DLAAQPLRGI KNIGPYWRRQ GELAEENASL RQQLIEARYW EDLAYRQRDR IEVYEEALDI
ESAAIEDRIG AWTVADPRGP FVRARLIGRG SDAGISDGYP VINLYGLVGR VYETGRRSAR
VLLLTDLNSR VPVMADRSNA RAILVGDNSE FPRLDYVGRA PDIEAGDRIV SSGDDGILPR
GLPIGEAVAT RDGGWRVRLY SDQAPVDFVW VWPYRRVTPP DQEAAEDPVG PDPAIVDNAV
APVPAVDTPV EGAEVDDVAT DDVATEDDEP EAGQ