| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1965 |
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| Symbol | |
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| ID | 4285898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | + |
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| Start bp | 2146006 |
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| End bp | 2147793 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638141465 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_757195 |
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| Protein GI | 114570515 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.546614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAG CCAGCAAGCT CGACCTTGAA GCGGAAATTT CCGCCGAGGC AGAAGTTGAA
AAGAATGAAG CCCGTGACTC GGCTCAGATC GGGAAGCAGG CGGTACGGGT CGATGCCCAT
GTCGAACGCG TACCGGCAGA TCGTCGCCGC GTCTTCCAGA AGGTGGCGGC GCTGGCCAAG
CGGGCCATGA AATCTTCTGC CGAGGGGGAT AATGTTGGCG CTGCGCGATT AGCCCACAAG
GCCTATCTCC TCGCCCCCGA CATGGCCCTG ACCAATCATG TCCTCGGTTT GATGCTGTAT
AATCTGGGCC GTCTTTCACG CGCGCTCGAC TTTTTCGAGG TCGCCTGGAA AATCGATCCG
AGCGATGCGG AAATTTACCA GAAGCTTGGC CTGGTCGCCT GGAAGCTGAA CATGCTCGAG
GCCGCCGAGA AATTCTATCG GCTTCAATAC AAGCTCGCCC CCGCGGCGGT CGATGCGGCG
ATCAATCTGG GCGGTGTCTT GCGTGATGCC GGGAAGTTTG AGGAAGCGAT CGAAATCCTC
CGGACGGCGA TCTATGCGCA TCAGGACGAC TACGAGCTCT GGAACTCGAT GGGCACGGTT
CTGAGCGACA AGGGCGAGCC CGAGGAGGCC AGAACATTCT ATCTGGAAGC GCTACGCCTT
AAACCGGATT ATGGCCGGGC CCACAATAAC ATGGCCAACA TCCACGAGTT GTTGGGCCAG
CCCTTGCTGG CGCTCCCGCA TTACGATGAA GCGCTCAAGG ACCCCGCCGA CGCGATGGAA
GAGGCGACGA TGCGACATGG CCGGTCCATG GCCCTTTTGT CGGCAGGTCG CCTGGCGGAA
GGTTGGGCAG CCGGTGAGAG TCGGCTCGAC CCCAATCGCG CGCAGGCCAC GCTTTTTACG
ATGAAGGCGC CTTACTGGGA CGGCACAGAC CCCGGGAGAC TGCGTGGAAA GACACTTGTC
CTCGTCGGGG AACAGGGCCT GGGCGACGAG GTATTGTTCA TGAACACTGT TCCGGACCTC
CTGGAAGCCC TCGGTCCGGA CGGCGAATTG CGCATTGCTT GCGAACAACG CCTGAGATCA
TTGGTCAAGC GCTCTTTTCC CACAGCCGTC GTGGGGAACC ACCTGTCAGC AACCATCGAG
GGCCGGGACG TTCGCGTCGC CCTAAAGCTT GAAGACGGCG CCGATTTCTG GACGCCGATG
GCCACGCCGC TTCGCGCTTT CCGAAACGAT ATTGCCGATT TCCCGGACAC CCACTTTCTG
GTTGCCGACC CCGACCTTCA ATCAAGCTAC CGCCAACAGA TGGATGGGTT TGGCGACGGC
CTGAAAGTCG GCATTCTCTG GAAGTCCCTG AAAATGGACG TCAAGCGCTC GAAGTTTTTC
TCGTCCTTCG ATGCCTGGGC CCCCGTACTC AAGACCAGCG GTGTTGACTT CATCAACCTG
CAATACGGAG AAGTTGACGA AGAACTGGCC GTCGCCAGGG ACCGCTTTGG CGTAAACATC
CATCAACCGC AGGGCCTCGA CCTTAAATTG GACCTTGACG GTGTCGCCGC CTATGCCTCG
GCCTGCGATC TTGTCATCGG CCCCATGAAT GCGACCAGTA ACCTGGCTGC GGCGTGTGGC
GGAAAAGTCT GGTTTGTTCA CTCGCGCTCC AGCGCCTGGA CGCTGCTGGG CACCCGCCAC
CAACACTGGT ATCCGCAGTC CCGCTCCTTT TTCGGCACCG GCTTTCAGGA CTGGTCCAAT
ACGATGGACC AGGTCGCCAA GGCTCTCTCG CAAGAGCTGG CCAGCTAG
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| Protein sequence | MQQASKLDLE AEISAEAEVE KNEARDSAQI GKQAVRVDAH VERVPADRRR VFQKVAALAK
RAMKSSAEGD NVGAARLAHK AYLLAPDMAL TNHVLGLMLY NLGRLSRALD FFEVAWKIDP
SDAEIYQKLG LVAWKLNMLE AAEKFYRLQY KLAPAAVDAA INLGGVLRDA GKFEEAIEIL
RTAIYAHQDD YELWNSMGTV LSDKGEPEEA RTFYLEALRL KPDYGRAHNN MANIHELLGQ
PLLALPHYDE ALKDPADAME EATMRHGRSM ALLSAGRLAE GWAAGESRLD PNRAQATLFT
MKAPYWDGTD PGRLRGKTLV LVGEQGLGDE VLFMNTVPDL LEALGPDGEL RIACEQRLRS
LVKRSFPTAV VGNHLSATIE GRDVRVALKL EDGADFWTPM ATPLRAFRND IADFPDTHFL
VADPDLQSSY RQQMDGFGDG LKVGILWKSL KMDVKRSKFF SSFDAWAPVL KTSGVDFINL
QYGEVDEELA VARDRFGVNI HQPQGLDLKL DLDGVAAYAS ACDLVIGPMN ATSNLAAACG
GKVWFVHSRS SAWTLLGTRH QHWYPQSRSF FGTGFQDWSN TMDQVAKALS QELAS
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