| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1920 |
|---|
| Symbol | |
|---|
| ID | 4285097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 2099117 |
|---|
| End bp | 2099905 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638141420 |
|---|
| Product | exodeoxyribonuclease III |
|---|
| Protein accession | YP_757150 |
|---|
| Protein GI | 114570470 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.19654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGA CCGTTGCTTC CTGGAACGTC AATTCCGTCA AGGCCCGCCT GCCCAATGTG
CTCGACTGGC TGAGCGAGGC CAAGCCGGAT GTCGCCTGCC TGCAGGAGAT CAAGACGGTG
GATGAGGGCT TCCCGCGGAT GGAGATCGAG GATCTGGGCT ATAATATCGA GACCCATGGC
CAGAAGTCCT ACAATGGCGT CGCCATCCTC TCCAAACACC CGATCGAGGA GCTCCGCTGC
GGCCTGCCGG GCGATGAGAG TGACGAGCAG GCCCGCTATA TCGAGGCGGT AATCGCGGCG
GAAGGCGGGC CGGTGCGCGT GGCGTCGATC TACCTGCCCA ATGGCAATCC GGCACCGGGC
CCGAAATACG ACTACAAGCT GGCCTGGATG GAGCGCCTGC GTCGGCACGC CCAAAACCTG
CTGACCTTCG AGGAACCGCT CATCCTCGCC GGCGACTATA ATTGCATCCC GCGCGACAGT
GATTGCTGGG ACATCGCCGA ATGGGAAAGC GACGCCCTCG CCTTGCCGCA AACCCGCGCC
GCCTTCCGGG CGCTGAAATG GCTCGGCCTG ACCGAGGCCT TCGAACAGCT CGACGGGCGC
GGTCACCAAT ACACATTCTA TGACTATCAG GCCGGTCGCT GGAACAAGGG GCATGGTATC
CGCATCGACC ACTTGCTGTG CTCGCCGCAG GCTGCCGATC ACCTTGAGGG CATCGAGATC
CACACCAAGA CGCGCGGCAA GGAAAAGGCC TCCGACCACA TTCCGATCGT CGGCAGTTTT
TCGCTTTAG
|
|---|
| Protein sequence | MTLTVASWNV NSVKARLPNV LDWLSEAKPD VACLQEIKTV DEGFPRMEIE DLGYNIETHG
QKSYNGVAIL SKHPIEELRC GLPGDESDEQ ARYIEAVIAA EGGPVRVASI YLPNGNPAPG
PKYDYKLAWM ERLRRHAQNL LTFEEPLILA GDYNCIPRDS DCWDIAEWES DALALPQTRA
AFRALKWLGL TEAFEQLDGR GHQYTFYDYQ AGRWNKGHGI RIDHLLCSPQ AADHLEGIEI
HTKTRGKEKA SDHIPIVGSF SL
|
|---|
| |