Gene Mmar10_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1875 
Symbol 
ID4284907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2049151 
End bp2049702 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content67% 
IMG OID638141375 
Productlysine decarboxylase transcriptional regulator, CadC 
Protein accessionYP_757105 
Protein GI114570425 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.800288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTTT CCTCACCCGG CGGCGACGCT TCAGCGACGC GTTTCCGGAT CGGCACGGCC 
CATTGTGACC TCATCGCCTG CGTGCTGGTG CGCAAGGGCG AGACCCATCG CCTCGAGCCG
CGCCTGGCCG GTGTGCTCCA CCTGCTCGCA AGGCGCGGCA TAAGCCCGGT CACCCGCGAT
GAATTCCTGG AGACGGTGTG GGAGGAGGAT GGCAGCGATG AAGCGCTCAA CCAGGCCATT
TCCCGCCTGC GGCGCCTGCT GGGCGATGCC AGCCTGATCC GCACCTTGCC ACGCATCGGC
TACAGCCTCA GCGCCCCGGT CGAGCGCGCC GAAACCCTGC CAAACCCGGC CCCGACCTCA
CCCTTCCAGG CCTGGCTGCG CACCGGCCTG GGCTTCATCC AGCGCCCCTT CCTCACCGGC
CTCGCCGTCG GCGTGCTTGT CACGGCGCTG CTGGCGAGCG TGTTCTGGCC GAGGACGCTT
GAGCAGGAGT TTGAGATTTT TACGGGGGAG TTGGATGAGG TTGGGGTGAC GCTGCCGGAT
GAGACGGAGT AG
 
Protein sequence
MTFSSPGGDA SATRFRIGTA HCDLIACVLV RKGETHRLEP RLAGVLHLLA RRGISPVTRD 
EFLETVWEED GSDEALNQAI SRLRRLLGDA SLIRTLPRIG YSLSAPVERA ETLPNPAPTS
PFQAWLRTGL GFIQRPFLTG LAVGVLVTAL LASVFWPRTL EQEFEIFTGE LDEVGVTLPD
ETE