Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1875 |
Symbol | |
ID | 4284907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 2049151 |
End bp | 2049702 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638141375 |
Product | lysine decarboxylase transcriptional regulator, CadC |
Protein accession | YP_757105 |
Protein GI | 114570425 |
COG category | [K] Transcription |
COG ID | [COG3710] DNA-binding winged-HTH domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.800288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTTT CCTCACCCGG CGGCGACGCT TCAGCGACGC GTTTCCGGAT CGGCACGGCC CATTGTGACC TCATCGCCTG CGTGCTGGTG CGCAAGGGCG AGACCCATCG CCTCGAGCCG CGCCTGGCCG GTGTGCTCCA CCTGCTCGCA AGGCGCGGCA TAAGCCCGGT CACCCGCGAT GAATTCCTGG AGACGGTGTG GGAGGAGGAT GGCAGCGATG AAGCGCTCAA CCAGGCCATT TCCCGCCTGC GGCGCCTGCT GGGCGATGCC AGCCTGATCC GCACCTTGCC ACGCATCGGC TACAGCCTCA GCGCCCCGGT CGAGCGCGCC GAAACCCTGC CAAACCCGGC CCCGACCTCA CCCTTCCAGG CCTGGCTGCG CACCGGCCTG GGCTTCATCC AGCGCCCCTT CCTCACCGGC CTCGCCGTCG GCGTGCTTGT CACGGCGCTG CTGGCGAGCG TGTTCTGGCC GAGGACGCTT GAGCAGGAGT TTGAGATTTT TACGGGGGAG TTGGATGAGG TTGGGGTGAC GCTGCCGGAT GAGACGGAGT AG
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Protein sequence | MTFSSPGGDA SATRFRIGTA HCDLIACVLV RKGETHRLEP RLAGVLHLLA RRGISPVTRD EFLETVWEED GSDEALNQAI SRLRRLLGDA SLIRTLPRIG YSLSAPVERA ETLPNPAPTS PFQAWLRTGL GFIQRPFLTG LAVGVLVTAL LASVFWPRTL EQEFEIFTGE LDEVGVTLPD ETE
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