| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1740 |
|---|
| Symbol | |
|---|
| ID | 4284930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1904646 |
|---|
| End bp | 1906562 |
|---|
| Gene Length | 1917 bp |
|---|
| Protein Length | 638 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638141228 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_756970 |
|---|
| Protein GI | 114570290 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.696561 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGC GATTGAAAAC TTCTCCGGCT GCCCGCGAAC TCATCAAGCG GTTTGAGCCA
TTTCGACCTC AGGCCGTAAA GGGCGATGAT GGCCGTTGGG TGGTGGGCTA TGGCCACCGC
GCCGCAGCCA AGCCCGGCGT GCGCGTCAAT GAAGATGAAG CGGCATTGCT GCTGATCTAT
GACGTCATGC GCGCAGAAGA AGTGGTGGAC GACAGCATTA CCGGCCCGCT GTCGCGCGGT
CAGCGTGATG CCCTGACATC CTTTGTCCAT GATGTGGGCG TTGACAGTTT TCGCGGCTCT
GAAGTGGCCC GCTACCTGTT CGAGGGACGG GCCCGCGCGG CTGGTGAGGC CCTGGCGGCT
TTCGGCGACG GTGTTTCGTC GCGCCGTGAA GCCGAGAGCC GGCTCTTTCT GGACGCTCTG
CTGCCGGCCC AGCCCGGCAA GGCACGCAAG TCCGAGCCGG TAGAACTTGT CATCAAGATC
GAGCACCCGA GCGAGGAAAG GGTCCTGGAA GGGGCCATTG CGGGCGAGAA CGCGTCGCCG
CCACCAGCCG GAGCTGACCT GCCGCCGCCA CCGCCACCCT TCGACGCCGG CCTGGCCCGG
CGCCGGGAGG CGGAAGACGA GATCGCCCGC ATCCTGGCGA CGGTGGAAGC CTTGCCGCCG
GAAGTCCGCC GCGAGTTGGG CGAGACCGAA ATGGCACCGG TCGCCGACGC GGTCTCCGAA
ATGCGGGACG ACCCGATCGA GGCGAGCTAT CACGCGGTGG ACGATGCCGC GGACGTTGAC
GATGCGAATG ATGCTGCACC CGAACTCGTC GACGAGGCGG CGCAGGATGC GCCTTCCGAT
GCCGCGGACG ACGCGCAAGC CGAGATCAAG TCCGCGGACG AAACGGATCC CGAGGCTGCG
GCCGACCGGG TGATCGCCCG CATGGCCGAG GATATCGCCG ACGTTGGTGG CGAGGACGGG
GCGGTTGTCG CGGAAGAGGC ACCGACGGAG AACGCGCGGG AGTCGCACGG GACCGCAAGC
GATACGCCTG CGACTGCGCC CCTGGCGGCA TTTGACCTGC CGGAGAGCAT GGGGTTGGGC
TTTGTGCTCA CAGACAACCA GCCGGTTCAG TCCTCCGAAG CTGAGCAACA GGCAGAACCC
GTTGACCAAG CAGTGGCGCC GGCCATTGCC GAGAATTCGC AGGCGGCCAA GGCCGTGCCC
GAACACTACG CCCTGGACCT GCCTGCCGGC ATGGGGCTGG GATATGCCCT GACCAGTGTG
ATGCAGGGCA GCTTTCAGAT CGATCCTGCC GAAATCGCAC CCGAACAGAC GGTTGCGGTT
GATGACGGTT CAGGCGAGGC CGAGCCCGAC GAAACCGCCG AGCCCGACGA AATAGACGAT
GTGACCGACA TGGAGGTCCA GCCGGCCTTG GACGCAGAGG CCGAGGTCGT CGAGCGCGCA
ATCACCGTGA CCGGTGACGA CACCCCGCCG CCGCATCCGG CAGAAACACC GGCGGAAGCC
GAGGGGGCGG TTGGTGATGT CGAAGGCGAG CCAGTCGCTG GCGAAGACAC CGGTTATGTG
TCGGCAGATG ATGATCTGGG CGATGACCCG ATGATGGCCG AACAGGATCC CATGGCTGAC
GCAGCCGACG ATTTCACACC GCGCGATCTG GCTGCCGACA TGCATGCAGC CGAGCCGAAA
CCCGGCCCTC GATCCGATGA TGGCATGTGG ACTTTCCTCG CCGTGCTGAT CGCCGGAGGC
CTGTTGGCCG GTATCGGCTC AGTGCTGGCC GCGTCGGAAT GGGACTACAT CATGGCGCAG
CGTGAAATGA CGCTGAACTT CGGCATGGCG CTCGCCGGAT TTTTCCTCGT CATCGTTGCC
GGATGGCAAC TCGCGTCCAT TTGGCTGTCC AAGTTGAAAC AAAAGGGTTC TGACTAA
|
|---|
| Protein sequence | MKPRLKTSPA ARELIKRFEP FRPQAVKGDD GRWVVGYGHR AAAKPGVRVN EDEAALLLIY
DVMRAEEVVD DSITGPLSRG QRDALTSFVH DVGVDSFRGS EVARYLFEGR ARAAGEALAA
FGDGVSSRRE AESRLFLDAL LPAQPGKARK SEPVELVIKI EHPSEERVLE GAIAGENASP
PPAGADLPPP PPPFDAGLAR RREAEDEIAR ILATVEALPP EVRRELGETE MAPVADAVSE
MRDDPIEASY HAVDDAADVD DANDAAPELV DEAAQDAPSD AADDAQAEIK SADETDPEAA
ADRVIARMAE DIADVGGEDG AVVAEEAPTE NARESHGTAS DTPATAPLAA FDLPESMGLG
FVLTDNQPVQ SSEAEQQAEP VDQAVAPAIA ENSQAAKAVP EHYALDLPAG MGLGYALTSV
MQGSFQIDPA EIAPEQTVAV DDGSGEAEPD ETAEPDEIDD VTDMEVQPAL DAEAEVVERA
ITVTGDDTPP PHPAETPAEA EGAVGDVEGE PVAGEDTGYV SADDDLGDDP MMAEQDPMAD
AADDFTPRDL AADMHAAEPK PGPRSDDGMW TFLAVLIAGG LLAGIGSVLA ASEWDYIMAQ
REMTLNFGMA LAGFFLVIVA GWQLASIWLS KLKQKGSD
|
|---|
| |