Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1585 |
Symbol | |
ID | 4284915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1733500 |
End bp | 1734234 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638141072 |
Product | helix-turn-helix, type 11 domain-containing protein |
Protein accession | YP_756815 |
Protein GI | 114570135 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0474711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCT CGAATTCAAA AGACAGGCTG CGGCGGATGG ACATGCTGGC TGTCCAGCTC AAGCAGGATG GGCTGTGCAC GGTCAGCGAT CTCGCACGGC AACATGATGT CAGCGAGCGC ACGATTGCCC GTGATCTTTT GCTCATGCGC GAGCAGGGCT TGCCCATTGA TTCCGACCGG GGGCGGGGTG GCGGCGTGCG GCTCGACCGC AATTGGGGGG TGGGCCGGCT GAACCTTTCC TATGCCGAAG CCGTTGACCT GCTGATTAGT ATCGAGGTGT CCGAACAGAT GCGCTCGCCG ATGTTCCTGG CCAGCCTGGG ATCGGTGCGG CGACAGCTTG TGGCGTCCTT CTCGCCGGAC AAACGCAACA AGGTGACCCG GATGAAGTCC CGGATCCTGA TTGGCGACAC GGCCTCTACC TATGTCCAGT CGGGTGTCGC TGCGCCGCCG AAACCCGTCG TGCAGGCCTT GCACCAGGCC TTCATGGATC AGGAAATGCT GGCGATCGGA TACCGGCGCG AAGACGGCGT GACGTCCGAA CGGCAGATCG AGCCGCACTA TCTCCTGCTG AAATACCCGG TCTGGTATGT GGTCGCCTTC GATCATCTCC GGGAGGCGAC GCGTGTGTTC CGGTGTGACC GGATCCTGTC GGCCAGACGG ACTGGCACGC AGTTCCGGCT TTTGCCCAGG GACGCGTTCG CGTCGTCGCT GGATGGCAAT GATTTGTTGG TGTGA
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Protein sequence | MARSNSKDRL RRMDMLAVQL KQDGLCTVSD LARQHDVSER TIARDLLLMR EQGLPIDSDR GRGGGVRLDR NWGVGRLNLS YAEAVDLLIS IEVSEQMRSP MFLASLGSVR RQLVASFSPD KRNKVTRMKS RILIGDTAST YVQSGVAAPP KPVVQALHQA FMDQEMLAIG YRREDGVTSE RQIEPHYLLL KYPVWYVVAF DHLREATRVF RCDRILSARR TGTQFRLLPR DAFASSLDGN DLLV
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