Gene Mmar10_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1583 
Symbol 
ID4284913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1729628 
End bp1730509 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content62% 
IMG OID638141070 
Productdihydrodipicolinate synthase 
Protein accessionYP_756813 
Protein GI114570133 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.122353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGG GATCCATGAC TGCGCTCGTC ACCCCATTCA AGAATGGGGC CGTGGACGAA 
GACGCTGTCG CTGCACTGGC CGAGCGTCAG ATCGCCGCCG GTACGCACGG GCTGGTTCCG
TGCGGTACGA CAGGTGAAAA CGCGACGCTG ACCTTTGAAG AGCACATGCG CGTCGTCGAG
ATTGTCGTCG TCACCGCCAA GGGGCGCGTG CCGGTGGTCG CCGGGACCGG TTCCAACAGC
ACTGCGGTTG CCATTGCCAA CCAGCGCCGG GCGAAAGAAC TCGGCGCCGA TGCCGGTCTT
GTCGTCGCGC CCTATTACAA CAAGCCAAAC GCCGAAGGTC TGTTTCAACA CTTCAAGGCC
ATCCACGACG CCGTCGATTT GCCGATTGTG GTCTACAACG TTCCCGGTCG GACCGTCGTC
GACATCCAGG CTGACACCGT CGCCCGGATC GCCGGTCTCG AGCGTGTGGT CGGTATCAAG
GATGCAACCG GCGACATGGC ACGGGTGTCG GACCATCGCC GTTTGATCGG CACCGATTTT
GTATTGCTGT CGGGTGATGA TCCGTCGGCG CTCGGATTCA ATGCTGCCGG TGGTGTCGGG
GCGATCTCGG TCACCTCGAA TGTCGCGCCG GACTTGTGCG CGCAGTTCCA GGACGCCACA
TTGGCAGGTG ACTGGGAGAC TGCGCGTGAG CTCAACGACA AGCTGATGCC TTTGCATCAC
GCGCTGTTCT CGTCATCCAG CCCCGGACCT GCCAAATATG CCCTGTCCGT GCTGGGCGTG
ATGAATACCG AGTTGCGCCT GCCGCTGACC GAGCCGAATG AGGCCTCCAA TGCCCAGGTC
CGGGCCGCCC TTGTCCATGC CGGCCTGCTT GATCGGGCCT GA
 
Protein sequence
MFKGSMTALV TPFKNGAVDE DAVAALAERQ IAAGTHGLVP CGTTGENATL TFEEHMRVVE 
IVVVTAKGRV PVVAGTGSNS TAVAIANQRR AKELGADAGL VVAPYYNKPN AEGLFQHFKA
IHDAVDLPIV VYNVPGRTVV DIQADTVARI AGLERVVGIK DATGDMARVS DHRRLIGTDF
VLLSGDDPSA LGFNAAGGVG AISVTSNVAP DLCAQFQDAT LAGDWETARE LNDKLMPLHH
ALFSSSSPGP AKYALSVLGV MNTELRLPLT EPNEASNAQV RAALVHAGLL DRA