| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1344 |
|---|
| Symbol | |
|---|
| ID | 4284664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1474189 |
|---|
| End bp | 1474830 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638140824 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_756574 |
|---|
| Protein GI | 114569894 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.179136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.106608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATG TTCAGGACAA ACTTCGGCCA CGAGGCCGTC CGGCCCTGGC TCCGGAAACC
CGCGAGCAGG CGCTCGCCGC CGCCGGAGCC TTGCTGGCGG AGCAGGGCTT GAACGGCATG
AAGGCCCGGA CCATCGCGGA ACGGGCCGGT CTCAGCGTCG GGTCGATCTA CAAGCTGTTC
GGCGATATCG ATGATTTGAT TCGCGAACTC AACATGATCA CCTATCGCGA TTTCGCCGAG
CATCACCGTC AGGCGCTGGA GCGGGCCGCC CTCGATCCGT CCGAGGTGCA CGGCCGGGTC
ATGGTGTTGG CAAGAGCCTA TGTGGATTTT GTAACCGCCG AGAATGCGCG TTGGCGGGCC
TTGTTGGCGT TCAATCGACG CCAGGGCGGT TCTGCGCCAC AATACTATAC GGATTACGAG
GACCAGCTTT TCAGGCTGGT GATCGACGTT CTCGAGGCGG CGCCCGGACT TGAGGATGCC
GCCTTGCGGG AGACATCCGC GCGGGCGCTC TGGGCGGCTG TCCACGGCAT TATCGGCATC
GTGCTGCCCA ATGCCAGTTA TGACGATCCG GTCGCCACCG CGATGAACCA GATCGAGATG
GTGGTGGGTG CTTATATTCG CGACGCTGCA CAGCGACGCT GA
|
|---|
| Protein sequence | MTDVQDKLRP RGRPALAPET REQALAAAGA LLAEQGLNGM KARTIAERAG LSVGSIYKLF
GDIDDLIREL NMITYRDFAE HHRQALERAA LDPSEVHGRV MVLARAYVDF VTAENARWRA
LLAFNRRQGG SAPQYYTDYE DQLFRLVIDV LEAAPGLEDA ALRETSARAL WAAVHGIIGI
VLPNASYDDP VATAMNQIEM VVGAYIRDAA QRR
|
|---|
| |