| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1279 |
|---|
| Symbol | |
|---|
| ID | 4284005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1389889 |
|---|
| End bp | 1391067 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638140758 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_756509 |
|---|
| Protein GI | 114569829 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.077943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACC CGCTCACCGA TCCCCGTTTT GCCAATAACC GCTCGCTGAT CGCGGCGATC
TGTTGTGCAG CCGTGTGTGG CATCGTGTTC GGGCTTTCCA TGCCGCTGAT CTCGCTGCGC
CTGGAGGGCA TGACCTCATC GGGTATGATT GTCGGTCTCA ACGGGGCGGC GGCGGCAGCC
TCGACGCTTG TCATGGCCCC GATCGTGCCA CGCTTGCTGT CCCTGATGCC GGGACGCGTT
CTGATCGTGA TCAGCCTCGT TCTGGCCGGC ACGCTGCACG CCCTCTTTCC CGTCTTTGAC
AATGTCCCGG CCTGGTTCGT CCTTCGCTTT GTCATGGGTT GCTTCATGAC GGTGATCTTC
GTGATCTCGG AGACCTGGAT CAACCAGATC GCCACGCCGC TGCGTCGGGC GACCATCCTT
GGCATTTACG GGACCGTGCT GTCCGGCGGC TTCGGGATCG GTGCTTTTCT CTTCGGACAG
CTGGGTGCGG TCAGCAATGC CGGCTTTTTT GCCGGCGGCT TGATCTTCAT GATCGGTGCG
CTGCCCATCA TTTTGCTGCA AGGCCCCGCC GCCCAGGCCC CGGACAAGGA TGAAGCCGCA
CCACGCGCCA TTCTGGGCGC CGCGAAAGCG GCGCCGGCGG CCATCGGGGC GGCGCTCGCC
TTCGGGGCAC TGGAGACTGT CCTTTTCTCC CTGGCACCGG TCTATGGCGA CCGCCTCGAC
CTCGATGAGC ATGGCATTTC CCTGGTGGCG ATGGCCGCCG CGGCGGGCGC CCTCGCCTTC
CAGATCCCGT TGGGCTGGAT CGCCGACCGC ACCGATCGCC GCGAAGCGCT GAAATGGATC
GCGACGACGG CCGCCATCAC CCCGCTCGCC ATCTGGGCTG TCGGTGACTA TCTGCCGGGC
ATGATGCTGC TTTTCTTCAT CCAGGCCGGC GTCGCTTCCG GGCTCTACAC GGTCGGCCTG
GCCCTGCTCG GAGAGCGCTT CTCCGGTGGC GGGATCGCGG CGGCCAATGC GGCTTTCATC
TTCGCCTATG GTGCCGGCTC GCTCTTCGGG CCGCCCGCAT CGGGCACCGC CATGGATATG
GTCGGACCAC AGGGGCTGAT GATCGTCATG GCCGGCATCG CAGCAGTCTA TGCTGCGCTG
GTGTGGCGGC GTGCATCGCG AACAGCCGGG AACAGTTGA
|
|---|
| Protein sequence | MTNPLTDPRF ANNRSLIAAI CCAAVCGIVF GLSMPLISLR LEGMTSSGMI VGLNGAAAAA
STLVMAPIVP RLLSLMPGRV LIVISLVLAG TLHALFPVFD NVPAWFVLRF VMGCFMTVIF
VISETWINQI ATPLRRATIL GIYGTVLSGG FGIGAFLFGQ LGAVSNAGFF AGGLIFMIGA
LPIILLQGPA AQAPDKDEAA PRAILGAAKA APAAIGAALA FGALETVLFS LAPVYGDRLD
LDEHGISLVA MAAAAGALAF QIPLGWIADR TDRREALKWI ATTAAITPLA IWAVGDYLPG
MMLLFFIQAG VASGLYTVGL ALLGERFSGG GIAAANAAFI FAYGAGSLFG PPASGTAMDM
VGPQGLMIVM AGIAAVYAAL VWRRASRTAG NS
|
|---|
| |