Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1272 |
Symbol | |
ID | 4283998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1384026 |
End bp | 1384487 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638140751 |
Product | endoribonuclease L-PSP |
Protein accession | YP_756502 |
Protein GI | 114569822 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.103554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00713107 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCGCCA TCGACACCCG CCTCGCCGAG CTTGGAATCA CCCTGCCGGA ACCGGTCGCG CCGGTCGCCA ATTATGTGCC CTTCGTGCAA AGCGGCAGCC AGGTCTTCAT TTCCGGCCAG GTCTCGATCG GCCCGGACGG GCTGGTGAAA GGAACGCTTG GCAAGGATAT GGACGTTGCC GCCGGCCAGG CCGCAGCTCG CCTGTGTGCC ATCAACCTCA TCGCCCAGCT CAAAGCGGCC TGCGGCGGCG ACCTGTCGCG GGTGAAGTGC GTTGTGAAGC TTGGCGGCTT TGTTGCGGCG GTACCGGGCT TCACCGAGAT ACCGCAAGTC ATCAATGGCT GTTCCGACCT GATGGTCGAG GTCTTCGGCG ATGCCGGTCG CCACGCCCGA TCTGCGGTCT CCTGCCCGGT CTTGCCGCTG GGTGCGGCCG TCGAGGTCGA TGGCGTGTTC GAAGTCGCCT GA
|
Protein sequence | MSAIDTRLAE LGITLPEPVA PVANYVPFVQ SGSQVFISGQ VSIGPDGLVK GTLGKDMDVA AGQAAARLCA INLIAQLKAA CGGDLSRVKC VVKLGGFVAA VPGFTEIPQV INGCSDLMVE VFGDAGRHAR SAVSCPVLPL GAAVEVDGVF EVA
|
| |