Gene Mmar10_1225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1225 
Symbol 
ID4286478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1335600 
End bp1336697 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content64% 
IMG OID638140705 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_756456 
Protein GI114569776 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0443365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.829291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG GTCGCCTGAA CCGCTACATG GCCAGCCAGA CCGCCGGTGG CCTGCTACTC 
GCCTTCCTGA CCATTGCCAC GGTCATCATT CTGGTCGATT TCGTCGAGCA ATCACGAGCG
GTTGGCACAC GGGTTGATGT GTCGACCCTC GACTTGCTGG GCCTGACATT GCTGCGAGCG
CCCGCCCTTC TGGAAAGCAC CCTGCCCTTC GTCTTCCTGT TCGGGACCCT GACCTCGCTG
TTCCGCCTGA ACCGGTCCAG CGAACTCATC GTCATGCGGG CATCGGGTAT CTCGGCCTGG
CGTATCCTCA CAGCCCCGAT GGTGTTGGCC GTCGGCATCG GTATCATCGG CGCGACCGGA
CTCAACCCGC TCGCGGCAAC CCTGAATGCC GAATTCGAAG CGCGCCGCGA CAGCCTGATG
AATGTCCGCC GGGTTGAAGG CGCGGAGCAA CCGGTCTGGC TGCGCGAGAC CAATATTGAT
GGCTTCACGG TCATCGCCGC CACCCAGCTG GAGGAAGCCC GCCAGGTCTT GCGCAACCCG
GTCTTCCTGC AATTTGCCGA AGATGCCTCG GGCACGCCGC GGCTGGAGCG GCGCATCGAT
GCCGAATCGG CGGAATTGCG GGCCGGGTTC TGGGAGGTTA CCGGTGCCAT CGAGAGGACG
CCGACGCCGT CGCGTCTCGA TCTTGGCGCC ATCGCCATGC CGACCTCGAT CAATCGGCAG
GCCTTGTTCG AACGGGCCCG CTCGGCGGAA GGCGTGGCGT TCTGGGATCT GCCGCGTCTG
ATAACCTCAG CGCGGGAGGC CGGGCTGGCG ACCCAACGCT ATGAATTGCG ACTGCATGCG
CTGTTGGCCT TGCCGCTGAC CCTGCTGGCG TCAACGCTGA TTGCAGCCGC CGCGACCTTG
CGCCTGCACC GCCTCGGCGG CGCGGCTGCG TTTGCAATGG CCGGAGGCAT AGCCGGTTTC
GTGATGTTCT TTTTCCAGGA AATGTTGAGC TCGTTTGGCG TTTCCGGTGC ACTGCCGCCA
GCGACGGCTG CCTGGTCGGC GCCGGCACTG ACCGCCTTGC TGGCGCTGAT CTATATTGCC
TCGACCGAAG ACGGTTGA
 
Protein sequence
MIAGRLNRYM ASQTAGGLLL AFLTIATVII LVDFVEQSRA VGTRVDVSTL DLLGLTLLRA 
PALLESTLPF VFLFGTLTSL FRLNRSSELI VMRASGISAW RILTAPMVLA VGIGIIGATG
LNPLAATLNA EFEARRDSLM NVRRVEGAEQ PVWLRETNID GFTVIAATQL EEARQVLRNP
VFLQFAEDAS GTPRLERRID AESAELRAGF WEVTGAIERT PTPSRLDLGA IAMPTSINRQ
ALFERARSAE GVAFWDLPRL ITSAREAGLA TQRYELRLHA LLALPLTLLA STLIAAAATL
RLHRLGGAAA FAMAGGIAGF VMFFFQEMLS SFGVSGALPP ATAAWSAPAL TALLALIYIA
STEDG