Gene Mmar10_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1115 
Symbol 
ID4285133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1219376 
End bp1221895 
Gene Length2520 bp 
Protein Length839 aa 
Translation table11 
GC content62% 
IMG OID638140593 
ProductTonB-dependent receptor, plug 
Protein accessionYP_756346 
Protein GI114569666 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.339476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.267741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCCA CCAAACGCAC ACTTTTGTTC GCCGCAGCCT CGGTGATCGC ACTGACCGGC 
GCTCAGGCTG CCGCCCAGGA CAGCCGCTCT GTCGACGTCA TCACCGTGAC GGCTCAGAAG
CGCGAACAAG GTATCCAGGA CGTCCCGGTT GCCGTGACGG CCTATAATGC CGAGCTGCTC
CAGAACGCCG GCGTCCGTGA CCTGAAGGAC CTCGCCGTCA TCGCGCCGGG CATCAACGTC
ACCTCGACCT CGAACGAGTT CGTCACCACC GCCCGTATCC GCGGCATCGG TACGGTTGGC
GACAATCCGG GTCTGGAATC ATCGGTTGGT ATCGTCATCG ACGGCGTGCC GCGCGCCCGT
AACGGCGTTG GCTTCAACGA CCTCGGCGAG CTCGAGCGTA TCGAAGTGCT GCGCGGCCCG
CAGGGTACGC TGTTCGGCGC CAACACCTCG GCCGGCATCA TCAATGTCGT GACCAAGCGC
CCCGAGTACG AGTTCAGCTC GCATGCCGAA CTGGAATACG TCGCCGGATC TGAAGAGGGC
TATGGCGTTG CTGGTGGCTT CACCGGTGGT GTGTCCGACA ATCTGGCGAT GCGCGTCTTC
GGCGCCTACC GCGAACGTGA CGGTTTCCAG ACTGTCGAGA CCTTCGGCGG CCCGCGCACG
GAAGACCGTG ACGGCGACCA GGACTACTTC ACCCTGCGCA CGCAATTCCT GCTCGATTTC
AGCGAGAATG TCAGCCTGCT CCTGTCGGCA GACTACACCA AGCGCGAAGA GTTCTGTTGT
GGTGCGCCGA GCCTCGTCTC GGGTCCGACC GCTGCGGCGA TCAACGCCTT GGTTCCCGGT
GCCCGCCCGC TGGCCGGTTC CGAGGACCCG TTCAGCCGCG TGATCCAGGC CAACCGTGAC
ACCGGTCAGA ACATCATCGA CCACGGTTAC AGCGGCGAGC TGAACTGGGA GTTCGACAAT
TTCGACATGA CGGCGATCGT CTCGGACCGC AGCTACAGCC TGCGCTCGGG TCAGGACACC
GACTTCACCG GTGCCGACAT CGTCTTCCGT GATGCGTCGA ACAACACCTT TGATTTCGAC
AACACCACGC TCGAGCTTCG CTTCTCTGGC GAAGGTGAAA GCGTCGACTG GATGTTCGGC
ATGTATTACT CGGACGAAAA TCTCGTCCGC GGCGATGCCA TCCAGATGGG CAATGTGTTC
GAACCCTATC TCGGTCTGCT CGGTGGCAGC CCGACCCTGG TCACCGATCT GGCCAATGGT
CTCGGCTTCA CCTTCATTCC GGGCTTCGGC GGCCTTGCAC CGGGTTCCGG CGCTCCGCTC
GGTGGCGGCA ATCCGCTGGG GGACACCTTC ACCCAGCAGG GTGAAAGCCT GAGCTTCTTC
ACGCACAACA CCTGGCATGT GCTGGAAAAC ACCGACATCA CCTTCGGTCT GCGTCACACC
AGCACCGACA AGGAAGCGAC GTTTGACTTT GCAGACAGCT CCGTGCCGGC CTGTGACGTC
TGGGAAGCCG TGTTCGGTGA CGCGCTGGAC TTCTCGACCC CGCTCAGCCA GGCAATCCTG
AACGGCTTCT CGGCCGGTTC CGGCGTGGCT GTGGCCGACC TGGTGACCTT CGGTACCTTC
ACCTGTCTGC CGTTCTCGCG TGATGTCTAC GCCCAGATCG ACAACACCCA GTCGCTGGAA
GAAAACCAGC TGTCCGGCCT GCTCTCCGTC TCGCACCGCA TCAATGACGA CTTCCTCGTC
TATGGTACGT TCTCGCGCGG CTACAAGGCC GGTGGCTTCA ACCTCGACCG CTTCACCCAG
GCGGGTTCTT CGGCGGTTGA TTTCCAGTCC GTCCTGGCTG ACCCGTCCTC CTATCCGGCT
CGTTTCGATC CGGAAGTCGT CGACAGTGTC GAGATCGGTT TCAAGACCGA ATGGTTCAAC
GACACGCTGC TGGCCAACCT GTACCTGTTC AGCTCGGACT TCGAGACCTA CCAGCTGAAC
ACGTTCAACG GCATCGGCTA CTTCGTCACC TCGATCGACG GTGCGTCGAC CCAGGGTGCC
GAAGCCGAGA TCCTCTGGTT GCCGGAAAGC ATGCCGGGCC TGACTGTTCA GGGTGGTGTC
ACCTACGCCG ACGCGCGTTA CGACAACTTC GCCCCGACCG GTACGGCTGA CGTTGACCGC
CTGTCCGGCC AGAACTTCTC GCTGGCTCCG GAATGGTACA CCTCGGCTTC GGTGTCCTAC
ACCGGTGAGC TTGAGGGCGG CATGAACTGG CTGGCCCACC TTGATGGTCG CTGGATGTCC
GAGCAGAACA CCGGTTCCGA CCTTGACCCG GAAAAGGTCC AGGACGGTTA CATGGTGTTC
AACGGCCGCG TCGGTCTCAG TGCCGAGGAC GAAGCCTGGT CGCTTGAACT CTGGGGTCGC
AACCTGCTGG ATGAAGAGTA TGTCCAGGTT GGCTTTGACG GTCCGTTCCA GCCGGGTTCC
TTTAACGCCT TCCTTGGTCA GCCGCGTACC TATGGTTTGA CCCTGCGCGT GCGCAACTAG
 
Protein sequence
MSSTKRTLLF AAASVIALTG AQAAAQDSRS VDVITVTAQK REQGIQDVPV AVTAYNAELL 
QNAGVRDLKD LAVIAPGINV TSTSNEFVTT ARIRGIGTVG DNPGLESSVG IVIDGVPRAR
NGVGFNDLGE LERIEVLRGP QGTLFGANTS AGIINVVTKR PEYEFSSHAE LEYVAGSEEG
YGVAGGFTGG VSDNLAMRVF GAYRERDGFQ TVETFGGPRT EDRDGDQDYF TLRTQFLLDF
SENVSLLLSA DYTKREEFCC GAPSLVSGPT AAAINALVPG ARPLAGSEDP FSRVIQANRD
TGQNIIDHGY SGELNWEFDN FDMTAIVSDR SYSLRSGQDT DFTGADIVFR DASNNTFDFD
NTTLELRFSG EGESVDWMFG MYYSDENLVR GDAIQMGNVF EPYLGLLGGS PTLVTDLANG
LGFTFIPGFG GLAPGSGAPL GGGNPLGDTF TQQGESLSFF THNTWHVLEN TDITFGLRHT
STDKEATFDF ADSSVPACDV WEAVFGDALD FSTPLSQAIL NGFSAGSGVA VADLVTFGTF
TCLPFSRDVY AQIDNTQSLE ENQLSGLLSV SHRINDDFLV YGTFSRGYKA GGFNLDRFTQ
AGSSAVDFQS VLADPSSYPA RFDPEVVDSV EIGFKTEWFN DTLLANLYLF SSDFETYQLN
TFNGIGYFVT SIDGASTQGA EAEILWLPES MPGLTVQGGV TYADARYDNF APTGTADVDR
LSGQNFSLAP EWYTSASVSY TGELEGGMNW LAHLDGRWMS EQNTGSDLDP EKVQDGYMVF
NGRVGLSAED EAWSLELWGR NLLDEEYVQV GFDGPFQPGS FNAFLGQPRT YGLTLRVRN