Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1115 |
Symbol | |
ID | 4285133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 1219376 |
End bp | 1221895 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638140593 |
Product | TonB-dependent receptor, plug |
Protein accession | YP_756346 |
Protein GI | 114569666 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.339476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.267741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCCA CCAAACGCAC ACTTTTGTTC GCCGCAGCCT CGGTGATCGC ACTGACCGGC GCTCAGGCTG CCGCCCAGGA CAGCCGCTCT GTCGACGTCA TCACCGTGAC GGCTCAGAAG CGCGAACAAG GTATCCAGGA CGTCCCGGTT GCCGTGACGG CCTATAATGC CGAGCTGCTC CAGAACGCCG GCGTCCGTGA CCTGAAGGAC CTCGCCGTCA TCGCGCCGGG CATCAACGTC ACCTCGACCT CGAACGAGTT CGTCACCACC GCCCGTATCC GCGGCATCGG TACGGTTGGC GACAATCCGG GTCTGGAATC ATCGGTTGGT ATCGTCATCG ACGGCGTGCC GCGCGCCCGT AACGGCGTTG GCTTCAACGA CCTCGGCGAG CTCGAGCGTA TCGAAGTGCT GCGCGGCCCG CAGGGTACGC TGTTCGGCGC CAACACCTCG GCCGGCATCA TCAATGTCGT GACCAAGCGC CCCGAGTACG AGTTCAGCTC GCATGCCGAA CTGGAATACG TCGCCGGATC TGAAGAGGGC TATGGCGTTG CTGGTGGCTT CACCGGTGGT GTGTCCGACA ATCTGGCGAT GCGCGTCTTC GGCGCCTACC GCGAACGTGA CGGTTTCCAG ACTGTCGAGA CCTTCGGCGG CCCGCGCACG GAAGACCGTG ACGGCGACCA GGACTACTTC ACCCTGCGCA CGCAATTCCT GCTCGATTTC AGCGAGAATG TCAGCCTGCT CCTGTCGGCA GACTACACCA AGCGCGAAGA GTTCTGTTGT GGTGCGCCGA GCCTCGTCTC GGGTCCGACC GCTGCGGCGA TCAACGCCTT GGTTCCCGGT GCCCGCCCGC TGGCCGGTTC CGAGGACCCG TTCAGCCGCG TGATCCAGGC CAACCGTGAC ACCGGTCAGA ACATCATCGA CCACGGTTAC AGCGGCGAGC TGAACTGGGA GTTCGACAAT TTCGACATGA CGGCGATCGT CTCGGACCGC AGCTACAGCC TGCGCTCGGG TCAGGACACC GACTTCACCG GTGCCGACAT CGTCTTCCGT GATGCGTCGA ACAACACCTT TGATTTCGAC AACACCACGC TCGAGCTTCG CTTCTCTGGC GAAGGTGAAA GCGTCGACTG GATGTTCGGC ATGTATTACT CGGACGAAAA TCTCGTCCGC GGCGATGCCA TCCAGATGGG CAATGTGTTC GAACCCTATC TCGGTCTGCT CGGTGGCAGC CCGACCCTGG TCACCGATCT GGCCAATGGT CTCGGCTTCA CCTTCATTCC GGGCTTCGGC GGCCTTGCAC CGGGTTCCGG CGCTCCGCTC GGTGGCGGCA ATCCGCTGGG GGACACCTTC ACCCAGCAGG GTGAAAGCCT GAGCTTCTTC ACGCACAACA CCTGGCATGT GCTGGAAAAC ACCGACATCA CCTTCGGTCT GCGTCACACC AGCACCGACA AGGAAGCGAC GTTTGACTTT GCAGACAGCT CCGTGCCGGC CTGTGACGTC TGGGAAGCCG TGTTCGGTGA CGCGCTGGAC TTCTCGACCC CGCTCAGCCA GGCAATCCTG AACGGCTTCT CGGCCGGTTC CGGCGTGGCT GTGGCCGACC TGGTGACCTT CGGTACCTTC ACCTGTCTGC CGTTCTCGCG TGATGTCTAC GCCCAGATCG ACAACACCCA GTCGCTGGAA GAAAACCAGC TGTCCGGCCT GCTCTCCGTC TCGCACCGCA TCAATGACGA CTTCCTCGTC TATGGTACGT TCTCGCGCGG CTACAAGGCC GGTGGCTTCA ACCTCGACCG CTTCACCCAG GCGGGTTCTT CGGCGGTTGA TTTCCAGTCC GTCCTGGCTG ACCCGTCCTC CTATCCGGCT CGTTTCGATC CGGAAGTCGT CGACAGTGTC GAGATCGGTT TCAAGACCGA ATGGTTCAAC GACACGCTGC TGGCCAACCT GTACCTGTTC AGCTCGGACT TCGAGACCTA CCAGCTGAAC ACGTTCAACG GCATCGGCTA CTTCGTCACC TCGATCGACG GTGCGTCGAC CCAGGGTGCC GAAGCCGAGA TCCTCTGGTT GCCGGAAAGC ATGCCGGGCC TGACTGTTCA GGGTGGTGTC ACCTACGCCG ACGCGCGTTA CGACAACTTC GCCCCGACCG GTACGGCTGA CGTTGACCGC CTGTCCGGCC AGAACTTCTC GCTGGCTCCG GAATGGTACA CCTCGGCTTC GGTGTCCTAC ACCGGTGAGC TTGAGGGCGG CATGAACTGG CTGGCCCACC TTGATGGTCG CTGGATGTCC GAGCAGAACA CCGGTTCCGA CCTTGACCCG GAAAAGGTCC AGGACGGTTA CATGGTGTTC AACGGCCGCG TCGGTCTCAG TGCCGAGGAC GAAGCCTGGT CGCTTGAACT CTGGGGTCGC AACCTGCTGG ATGAAGAGTA TGTCCAGGTT GGCTTTGACG GTCCGTTCCA GCCGGGTTCC TTTAACGCCT TCCTTGGTCA GCCGCGTACC TATGGTTTGA CCCTGCGCGT GCGCAACTAG
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Protein sequence | MSSTKRTLLF AAASVIALTG AQAAAQDSRS VDVITVTAQK REQGIQDVPV AVTAYNAELL QNAGVRDLKD LAVIAPGINV TSTSNEFVTT ARIRGIGTVG DNPGLESSVG IVIDGVPRAR NGVGFNDLGE LERIEVLRGP QGTLFGANTS AGIINVVTKR PEYEFSSHAE LEYVAGSEEG YGVAGGFTGG VSDNLAMRVF GAYRERDGFQ TVETFGGPRT EDRDGDQDYF TLRTQFLLDF SENVSLLLSA DYTKREEFCC GAPSLVSGPT AAAINALVPG ARPLAGSEDP FSRVIQANRD TGQNIIDHGY SGELNWEFDN FDMTAIVSDR SYSLRSGQDT DFTGADIVFR DASNNTFDFD NTTLELRFSG EGESVDWMFG MYYSDENLVR GDAIQMGNVF EPYLGLLGGS PTLVTDLANG LGFTFIPGFG GLAPGSGAPL GGGNPLGDTF TQQGESLSFF THNTWHVLEN TDITFGLRHT STDKEATFDF ADSSVPACDV WEAVFGDALD FSTPLSQAIL NGFSAGSGVA VADLVTFGTF TCLPFSRDVY AQIDNTQSLE ENQLSGLLSV SHRINDDFLV YGTFSRGYKA GGFNLDRFTQ AGSSAVDFQS VLADPSSYPA RFDPEVVDSV EIGFKTEWFN DTLLANLYLF SSDFETYQLN TFNGIGYFVT SIDGASTQGA EAEILWLPES MPGLTVQGGV TYADARYDNF APTGTADVDR LSGQNFSLAP EWYTSASVSY TGELEGGMNW LAHLDGRWMS EQNTGSDLDP EKVQDGYMVF NGRVGLSAED EAWSLELWGR NLLDEEYVQV GFDGPFQPGS FNAFLGQPRT YGLTLRVRN
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