| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1045 |
|---|
| Symbol | |
|---|
| ID | 4285326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1138826 |
|---|
| End bp | 1140508 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638140516 |
|---|
| Product | peptidase M28 |
|---|
| Protein accession | YP_756276 |
|---|
| Protein GI | 114569596 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2234] Predicted aminopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.268975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATC TCATTACGGC TATTGCCGGA CTCGCTCTGG CGGGTTGCTC GGTCGAGACC
GACAACACGA CAGACACTGC TGACGCGGCC TTCATGCCGA ATGTCAGCGC CACGAATATT
GAAGCGCATA TCCGCTTTCT GGCATCCGAT TACCTCGCCG GCCGCGATGC CGGTACGGAC
GGCTATGAAA TCGCCGCAAA TTACGTCGCC GCACAAATGC GCCTTCTGGG CCTCGAGCCG
GCCGGCGATG ACGGCACCTA TTTCGCCGAC GTGCCGATGC AGGAAGTGCG TCCCGATGCC
GACTACAACC AGTTCACGCT GGACGGCGAA ACCTTCGCCC ATGGCACGGG TGCCTTTATC
GGTACCAATC CGAGTGTTCT GGAGGCGGAA GTCGCCGGCG AGCTCGTCTT CGTCGGTCAC
GGCGTCTCAG CTGCCAATCG CGGCCATGAT GACTATGACG GCCTCGACGT CGACGGTCGT
ATCGTTGTTG TCATGGGCGG TGTGCCCGAG AATGTGTTCG AGGGTTTGTC CGAGGAACGT
GCCCACCACA ATTCCGGCAC CACCAAGCGC AATGTTGCAG CCGCCCACGG TGCCATCGGC
ATGATCTCGA TCACCGGCTG GACGCAGGAG CGACTGACTG ATTTTGCAGC CGGCTTCGGC
AGCCGCCCGA GCGTACGCCT GACCGCGGCG ACCGGCCCGT CTGGCTATGA CACGGTTCAG
GCCTCGGCCA ATGTCACCGC CGAACTGGCC GCGCGCCTGT TTGAAGGCGC CGACATGAGC
CTGGAGGATG TCCAGGCTGC CATGTCCGCC GACGAGCCGA CCTATCCGCG CTTCGCTCTG
CCCCACACCG CAACCATCCG CCAGCGCACC CTATCTGACC CCTTCAACGA CCCGAATGTG
GTGGGCATGA TCCGCGGCTC CGACCCGGTC CTGGCCGATG AGATTGTCGT GTTGTCGGCC
CATCTCGACC ATATCGGTTC CGTGACCGAG CACATGCGAG CCGGCGGGTC CTGCCGCGCC
ACCGACGAGA GCGATGAAGT CTGTAACGGC GCCGTCGACA ACGCGTCTGG CATCTCCATC
ATGCTTGAGA CGGCCCGGAC TTTCCTGGAA GAAGGCACCC CGCGTCGCTC AATCGTCTTT
GTCGCCCTGA CCGCGGAAGA GAAGGGCCTG CTGGGTTCGG AGCATTTCGC CCGCAACCCG
TCGGTTCCGG CCGAGCAGAT GGTCGCCAAC GTCAATCTCG ACATGCCCGT GATCGTCTAT
GACTTCGCGG ACGTGATCGC CTTCGGGGCC AATCACTCCA ATCTCGGACC GATCGCCAGC
CGTGCCGCCG ACCGCCTCGG CATCATGGTG AGTGAAGACC CGCTGCCGGA GCAGTCACTT
TTTGTGCGCT CGGACCACTA CAACTTCGTT CGCGAAGGCG TGCCGTCGCT CTTCCTGATG
ACCGGCTTCT CCTCGCCGGA TCCGCGCTGG GACGAGGGCG AAGGCTTCAT GGGCTTCTTG
ACCACGCATT ACCACCGTCC GACCGACCAA CTGGACGGCG AGCTGGAAGT CCTGTTCGAG
CAGGGCGCCA AATTCGCCAA CATCAACTAC ATGATCGCCC GCGAAATTGC TGACAGTGAC
GTGCGGCCGG CCTGGAATGA TGACAGCTTC TTCGGCAACC TCTTTGGTGG TGACGCCGAG
TAG
|
|---|
| Protein sequence | MKYLITAIAG LALAGCSVET DNTTDTADAA FMPNVSATNI EAHIRFLASD YLAGRDAGTD
GYEIAANYVA AQMRLLGLEP AGDDGTYFAD VPMQEVRPDA DYNQFTLDGE TFAHGTGAFI
GTNPSVLEAE VAGELVFVGH GVSAANRGHD DYDGLDVDGR IVVVMGGVPE NVFEGLSEER
AHHNSGTTKR NVAAAHGAIG MISITGWTQE RLTDFAAGFG SRPSVRLTAA TGPSGYDTVQ
ASANVTAELA ARLFEGADMS LEDVQAAMSA DEPTYPRFAL PHTATIRQRT LSDPFNDPNV
VGMIRGSDPV LADEIVVLSA HLDHIGSVTE HMRAGGSCRA TDESDEVCNG AVDNASGISI
MLETARTFLE EGTPRRSIVF VALTAEEKGL LGSEHFARNP SVPAEQMVAN VNLDMPVIVY
DFADVIAFGA NHSNLGPIAS RAADRLGIMV SEDPLPEQSL FVRSDHYNFV REGVPSLFLM
TGFSSPDPRW DEGEGFMGFL TTHYHRPTDQ LDGELEVLFE QGAKFANINY MIAREIADSD
VRPAWNDDSF FGNLFGGDAE
|
|---|
| |