| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0839 |
|---|
| Symbol | |
|---|
| ID | 4285944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 930040 |
|---|
| End bp | 930669 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638140305 |
|---|
| Product | signal peptidase I |
|---|
| Protein accession | YP_756070 |
|---|
| Protein GI | 114569390 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.240301 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0615193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCGCT GGGTTGCGGG TCTGGGTCTG ATTGTTTTCG GCCTAGCCTC CAGCCTGTTC
TCCAGCCTGG CCCTGTTTTC CACGCAGGCG ATGAGCATGA TGCCGGCCGT CGAGCCCGGA
CAGCGTTTCA TCGTCAACAA GCTGGCCTAT GGCTACAGCA CGGTCAGCCT GCCGCTGGTC
GGTACCCGGC TTGATCCGAA CAGGCTGGTT GCCGGACCGG CGCCGCGGCG CGGTGATATC
ATCGTTTTCC TGGACACGAC GCAGAGCCCG GCGCGGACGA TTGTCAGCCG CGTCGCTGCC
GTGGCGGGTG ACGAAGCCGC CTATGATGGT GGGCGCCTTG TCATCAATGG CGATTATGTC
CAACGCGACG CACTCGGCCC GGAGACGCTT GTCACCCGGG GCAGGCCACA ACAGGTGACC
CGATATCGCG AAACGCTTCC CGGTGGCATG TCACACGAGA TTTTCGAGCT GGGTGATGAA
GGACCGATGG ATCAGACCTG GCCCGTTACC GTGCCGGAGG GCCATGTCTT CGTGCTTGGC
GACAATCGGG ATCAATCTCG TGACAGTCGC GCTCCGGGCG GCCCGGGCAT GGTCCCGCTG
GCGCGCATTC TGGGTCGTGT CAGCGACTAG
|
|---|
| Protein sequence | MWRWVAGLGL IVFGLASSLF SSLALFSTQA MSMMPAVEPG QRFIVNKLAY GYSTVSLPLV
GTRLDPNRLV AGPAPRRGDI IVFLDTTQSP ARTIVSRVAA VAGDEAAYDG GRLVINGDYV
QRDALGPETL VTRGRPQQVT RYRETLPGGM SHEIFELGDE GPMDQTWPVT VPEGHVFVLG
DNRDQSRDSR APGGPGMVPL ARILGRVSD
|
|---|
| |