| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0423 |
|---|
| Symbol | |
|---|
| ID | 4285557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 502769 |
|---|
| End bp | 503752 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638139886 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_755654 |
|---|
| Protein GI | 114568974 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTTA TCATAGCTGC CATCGCTGCC TTCATGGCGG TGGGCGGTGT TGGATGGGTT
GCCGTCGGTG CGGTCGGTGA CGCGCAGTCG AAAAAGCGCA TGAACCGGGC GGTCGGGACC
GGCGGTCTCC AGCGCGGGCG CCGTCAGACC TCGGCGCTCG ACCAGGCTGC ACAACGCAAG
CGGCAGGTCC AGGAATCGCT CAAGGATCTC GAACAGCGCC AGCGCGACCA GCGCAAGAAG
TCACTGTCCA TCAAGGCCCG TATCCAGCAG GCCGGCATGT CTTTCACGCC GGCCGTGTTC
TGGATGGTCT CGGCCGGTAT GGCCGCCGCA GGATTGCTGA TCGCCTTCAT TACCGGGCAG
AGCCTGCTGG TGACCGCTGG TATCGGCCTG GTCAGCGGCC TCGGCATGCC GCGCTGGTGG
CTCGGCTTCC TGCGCGGACG GCGCCAGAAA CAGTTTTCCG GCGAATTCGC CAATGCGCTT
GACGTCATCA CACGCGGTGT CAAATCCGGT CTGCCACTCA ATGAGTGTCT GAAAATCCTC
TCGGTCGAGA GCCCGGAACC GGTCAAGACC GAGTTTGCCA AACTGGTTGA GGGCATCGCC
GTCGGCGTGT CTCTGCCCGA TGGCCTGGAC CGGATGTGCG AGCGCATGCC GTTGCCAGAG
CTCAACTTTT TCCGCACCGT TCTGATCATC CAGCAGAAGA CCGGCGGTAA CCTGGCCGAG
ACCCTGGGCA ATTTGTCCGT GGTCCTGCGC TCCCGCAAGA TGATGCGCGA GAAGATCGGC
GCCCTTTCAT CCGAGGCCAA GTCGTCTGCC GCGATCATCG GCTCGCTGCC GCCAGGCGTG
ATGGGCATCG TCTATGCCAC CACCCCGTCC TATATGGGCC AGATGTTCAC CCACCCGACC
GGCCAACTGA TGCTGCTGGG TGGTCTGACC TGGATGTTCA TCGGCATCAT GGTCATGCGC
GGCATGATCA ACTTCAAGAT CTGA
|
|---|
| Protein sequence | MAFIIAAIAA FMAVGGVGWV AVGAVGDAQS KKRMNRAVGT GGLQRGRRQT SALDQAAQRK
RQVQESLKDL EQRQRDQRKK SLSIKARIQQ AGMSFTPAVF WMVSAGMAAA GLLIAFITGQ
SLLVTAGIGL VSGLGMPRWW LGFLRGRRQK QFSGEFANAL DVITRGVKSG LPLNECLKIL
SVESPEPVKT EFAKLVEGIA VGVSLPDGLD RMCERMPLPE LNFFRTVLII QQKTGGNLAE
TLGNLSVVLR SRKMMREKIG ALSSEAKSSA AIIGSLPPGV MGIVYATTPS YMGQMFTHPT
GQLMLLGGLT WMFIGIMVMR GMINFKI
|
|---|
| |