| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0392 |
|---|
| Symbol | |
|---|
| ID | 4286485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 465397 |
|---|
| End bp | 465879 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638139855 |
|---|
| Product | peptidase A24A, prepilin type IV |
|---|
| Protein accession | YP_755623 |
|---|
| Protein GI | 114568943 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.354362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCACA TTCACCTCGC CACAGTCATC CTCGTCGTCA GCCTTGCCTG GCTTGCCTGG
ACTGATGCGC GCAGCTTCCG CCTGCCCGAC ATCGGCACCC TGCCGCTGAT CGTCGCCGGT
GTCGTCCTGA ACACGCTCTG GCTCGGCACG CCCTGGACAT CGCTGATCGG TGCCGCATTG
GGCTATGGCA GCTTTGTCGC CATCGAGATC GGCTACCGGC ATTTGCGCGG CCGCGACGGG
CTGGGGCGCG GCGATGCCAA GCTGATGGGG GCCGCGGGTG CCTGGTGCGG CGGCTGGCTG
CTGCCGCTGA TCGTGCTGAT CGGCACGCTG GGCGCGCTCG TCTTCATCGC GCTCCTGGCA
CTGCTGCGAC GTCGCCTGCC CGATGGCAGC CAGCCCTGGC CGTTCGGGCC CTGGCTGGCA
TTGGGCTTTT TCGCCGGCTG GCTGCACCGC GCCTACGGGC CGGGGCTTTA TCCCGGATTC
TGA
|
|---|
| Protein sequence | MIHIHLATVI LVVSLAWLAW TDARSFRLPD IGTLPLIVAG VVLNTLWLGT PWTSLIGAAL
GYGSFVAIEI GYRHLRGRDG LGRGDAKLMG AAGAWCGGWL LPLIVLIGTL GALVFIALLA
LLRRRLPDGS QPWPFGPWLA LGFFAGWLHR AYGPGLYPGF
|
|---|
| |