| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0287 |
|---|
| Symbol | |
|---|
| ID | 4284029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 339280 |
|---|
| End bp | 340869 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638139750 |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_755518 |
|---|
| Protein GI | 114568838 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.297588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.444941 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCC CGACACTGAG ACCCGTTCCG ACTCCACAGC CCGACCGGCT GCGGATTTTC
GACACCACGC TGCGCGATGG TGAACAGGCG CCCGGCTTCT CGATGAACCC GGCGGAGAAA
CTCGAAATCG CCCGTCTGCT CGAAGCGATG CGGGTCGACA CGATCGAGGC GGGATTTGCC
GCCGCCTCGC CCGGCGACAG CGAAGCCATC CGCCTCATCG CCTCGGAAAT CCGCAACTCG
ACCCTGTGCT CGCTGGCACG GGCCACCGAG GGCGATATCG ACGCGGCGGC CAAGGCGCTG
GAACCCGCGC ATCGCAAACG CCTGCACATC TTCCTGGCCA CCAGCCCGAT CCATCGCGAA
GCCAAGTTGC GCATGTCGCG CCGCGAAGTG CTGCAGACCA TTGAGCGCTG CCTCAAGCAC
GCCGCCGGCA CGTTCGACGA GATTGAGTTT TCGGCCGAGG ATGCCCTGCG CACAGAGCCG
GACTTCCTGG TCGAGGCGAT GAGCTGCGCC GCGGTCAACG GCGCCGATGT CCTGAATGTG
CCTGATACGG TCGGCTATTC CGAGCCGGAC GAAATCCGGG CGGTATTCGA ACGTCTGGCA
GCCCATGTCG AACGGCCCGA CCACGTGATC TTCTCGGCCC ATTGCCACAA TGACCTGGGT
CTTGCCGTGT CCAACTCGCT GGCCGCCGTG AAGGGCGGGG CCCGCCAGGT CGAGTGCGCC
ATCAACGGCA TCGGCGAACG GGCCGGCAAT TGCTCGCTGG AGGAGATCGT CATGGCCTTG
CAGGTCCGGG CTGACATCTT CCCGGCCATC AGCCATGTCG ATGCGACCAA GATCTGGTCG
GCCAGCCAGC GCCTGGCCCG GGTAACGGGA AGCGCGGTTG CCCCGAACAA GGCCATTGTC
GGCAAGAATG CCTTCGCCCA CGAGGCCGGC ATTCACCAGC ACGGCATGAT CTCGGACCGT
CGCACCTATG AAATCATGAC CCCGGAAAGC GTCGGCGCAC CGGGTTCGGC CCTGGTGCTG
GGCAAGCATT CGGGCAAGCA CGCCCTGGTG CAGCGCCTGG CCAAGCTGGG CTATCAGCCG
GACCCGGACA AGCTGAACCA GGTCTTCAAG GATTTCAAAC ACCTGGCCGA TGAGCTGGGC
GAAGTGAATG ATGCCGATCT GGTTGCCATG ATGGAGGGAT TCTCCGCCAG CGGTTCGCGC
TGGACCGTTC TGCGCACCGA GCTGCGTACA ACGGCCGGTC GCCAGCCCAA ACAGTTTGCC
CGCGTCGAAC TGGAGCATCC AGACCGCGGC CGCGTCTCCG ACATCGCGTC CGGCGACGGC
CCGATTGCGG CGGCCTTTGC AGCGGTCCAG CGCATCACCG GCACGGATGC CACCGTGACG
GCTTTGGAAA CCCGCATGCG ATCGACCGCG ACCGGTCGCG AATTCGTCGC CGATATCAGC
ATCGACATTG ACGGCACGAT CTTCTCCGGG CGCGCGCGTG GCCCCGATAT CGTCACCGCA
GCCATCGACT CGCTGCTCTT CACACTCGAT CGCGGTGAGG CCTATGGCCG GGCCGACTTG
ACCCAGCAAC AACCGGCCGC GGCCGTCTGA
|
|---|
| Protein sequence | MSAPTLRPVP TPQPDRLRIF DTTLRDGEQA PGFSMNPAEK LEIARLLEAM RVDTIEAGFA
AASPGDSEAI RLIASEIRNS TLCSLARATE GDIDAAAKAL EPAHRKRLHI FLATSPIHRE
AKLRMSRREV LQTIERCLKH AAGTFDEIEF SAEDALRTEP DFLVEAMSCA AVNGADVLNV
PDTVGYSEPD EIRAVFERLA AHVERPDHVI FSAHCHNDLG LAVSNSLAAV KGGARQVECA
INGIGERAGN CSLEEIVMAL QVRADIFPAI SHVDATKIWS ASQRLARVTG SAVAPNKAIV
GKNAFAHEAG IHQHGMISDR RTYEIMTPES VGAPGSALVL GKHSGKHALV QRLAKLGYQP
DPDKLNQVFK DFKHLADELG EVNDADLVAM MEGFSASGSR WTVLRTELRT TAGRQPKQFA
RVELEHPDRG RVSDIASGDG PIAAAFAAVQ RITGTDATVT ALETRMRSTA TGREFVADIS
IDIDGTIFSG RARGPDIVTA AIDSLLFTLD RGEAYGRADL TQQQPAAAV
|
|---|
| |