Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0251 |
Symbol | |
ID | 4284115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 284060 |
End bp | 288139 |
Gene Length | 4080 bp |
Protein Length | 1359 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638139714 |
Product | outer membrane autotransporter |
Protein accession | YP_755482 |
Protein GI | 114568802 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0490823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGCGG TCAATCGGGG TGTGCGGACA GATGCCAAGG CTGGCGCGCC GCGCCGTGTG TCCATGCTGC TGGCCGGGAT CGCGCTGGGT TTTTCGGCGC CGGTTCACGC GGCTGATAAT GCCAGTGTGA GCCGGGTTCA GCTTTTGATA GACCGTCAAT GTACCGCCGC GTCTCCCACA GTTTTCGGTA CGACTGTTGC ATACACTGGC ACTGTCGATG ACTTGCCGGG AAACGCCAAT GTCGGCGACA TTGTCCAAAT CTATCACCTG GATGGAAATA ATTCTGTTGT TGCGCGAAAT TCTGGTTACG CGGGCTCTCT GAATGCGCAG GTCGGAGTGC AAAGCGGTGC GAACGCCGCC ACTTTGATGA TCGCAACGCC GGCAACGCAT CCCTATACCG CCGTGCTGTG GGACGCGACG ACTGACACTT TCGCCTTCAA CGCCGGCGAC ACGCTGGATG TTAACGCGCC GGAAGTGCTG GCCACCATGT CATTTGACAT GAATGCGCTG GACGCTGATT GCCCGGGCGG CCCTGCGGCG GATACGACTC CGCCGCAGCT GGCGAGCATT GAGCGTAGTA CCCCTGCGGA TGAGTTCACA AGCTACGATT TTTTGGTCTG GCGGGTCACG TTTGACGAGG ACGTTCAGGG GCTCGATACC AACGATTTCG CGATTTCTGG AACAACAGCC AGCATAGACA CCGTAACCGC AGGATCAGGC GCATCAGAGT ATTCGGTGAG AGCACGCGGT GGCGACCTCG CGACGCTGGA CGGTGTGGTC AGCTTGTCGA TCAGCGGCTC GGCGACCATC GAGGACACGG CCGGAAACAG CCTGACCAAC ACGGCTGCGA CTGGCGCGAC CGAGACTTAT ACGCTCGACA ACACGGCGCC GACCGTGACC TTCACGAATG GCACACCTGA CCCGGCCACG GGTGCTTTCC AGCTGACAGC GACCCTCTCG GAAGCGGTCG ATCAATTCAG TACTGACGGC ATAACCGTCG GCAATGGGAC CCTCTCAAAC ATCGTGGCCG TCAGCGGGAC GGTTTACACC GCGACTGTCA CGCCAACCAC GCGCACATTG GTTACAATTG ACATGCCGTT TGGTTGGGCC GTCGACCTCG CTGGCAACAT CAATTCCGCA GCCACACAGC TCGTCGTCGA CGTGTCCATC GATACTACGC CGCCGACGGT GGCGCTAACG TCATCAGCGA CCTCGCCGAC CAATGCGCCG TTCACTGTCA CCGCCACCTT CTCGGAAGAT GTCACAGGTT TTGATGCCTC GGACCTCCAG GTCACGAACG GTGCGGCGTC CAATACCCAG ATGGCCAGCG CCAGCGTCTA CACCGCTACC GTTACGCCGG CGGCGGATGG CGATGTCGTC ATCACCGTCC CGGCCGGCGC GGCGCAGGAC GGCACGAGCA ATGCCAGCCT GGCGGCAACG CCGGTGACGA TAGTCTTCGA CGCCACAGCC CCGACCGTGG CCATAGCGGC CAATGTTGGC CCAACAGTGG GCGGACCGTT CGAAGCTACT TTCACCTTCT CTGAAAGCGT TACCGGGTTT GCCGAGGGCG ACATTACCGT CGGCAACGGC ACAGCCTCCA ACGTCAACGG CGTCAGCCAG AGTGTCTATA CAGCGACGAT CACACCGGCC GCTGATGGCC AGGTCACCAT CGATGTCGCC GCACAGGCGG CCTTCGACCT GGCCGGTAAT TTCAGTACAG CTGCTGCACA ATTCACCATC ACCAAGGTGT CCGATGCAAT TCCGCCAGAT GTGGTGCTGA GCACCAGCGC CACCGATCCG GTGTCGGGCG CATTCGCCAT CACCGCAACC TTCTCGGAAG ATGTGACGGG CTTTGAGCTC GCCGATCTGG TCGTCGGCAA TGGCGTGGCG TCGAATTTCA GTGCAGTCAG TGCCAGCGTT TATACAGCAG ACATCACGCC TACGACCGAC GGTGCGGTGA CTGTGGACGT CGCGACCGGT GCCGCCAATG ATGGCGCCGG CAATCCCAGC ACGGCGGCCG CACAATTCTC GATCAGTTCC GACGCGACGC CACCGGGTCT GGCGATCAGC CTTCCAGGTG CCACTGTCGA GGGCACGTTC ACCGCGACTT TCACCTTCTC TGAAGGCGTC ACCGGGTTCG AGTTGAGCGA TATCACGGTC ACCAACGGTG CGGCCTCGGC GCTGACCCCG GGCGCAACCG GTGTCTACAC GGCCACCATC ACCCCCGAAA CAGTCGGCGC GCTGACGGTT TCAGTGGCCG AGGGGGCGGC GCAGGACTCG GCCGGCAACG GGTCGGCAGC TGACAGTGCC AGCGTTGAAG TGGTTTTCCC GGCGGTGGAT GTTGATCTCG ACCTGGGCTC GACAGTCCTT GATCCCAACA GCGTCACGAC GACCGTGACG CTGTCGAATC CGGGCAGCCT GGCGGTCGAT TTCGTTGCTT CTGTTGATGT GCCCTGGGCT GACGTGACGC CTTCAAGCGG GACGATCCCG GCATCAGGAA GTATTCAATT CACCGTTGGC CTCAACGCCG AGGCAGACGG ACTCGATCCG GGCGACTATT CCGGCACGGT GACGGTCACG ACGGCCGCGC CGGCAGGCCA AGCAGCCCAA GCGTCGCGCG GGCCGGCATC GGCTGGCTCC ACCGTCCTGG CCAATATTCC GGTCACCGCC TCAATCGCAG CACGCTTTGG TTCGCTTCAG GTCGTTGCCA CCACGCCGGG CGGGACCCAT GGCGACGAAA CATTCACCTA TGCCTCCAGC GACGCCGATC TGGGTGGTCT GAGTCTGACC ACATCTGGTG GTGCGGCTAG CTCGGCCCCG ATCCAGAAGA TCTTCGGCAC CTACGACCTC GCCCAGAGCC TGCCGCAGGG CTGGGCGCTC GAGAGCCTGA CCTGCGCCGG CGACACCGAT GGCGGTTCCG TGATCGACCT GGCAGCCGGT TCGGTGGATA TCGACCTGGA TCCGTCCGAG ACCATTGTGT GCACATTCGC CAACACTCGC GATGCAGACG CAGTCCGTCT GGCGACCTTG CGGGCGATCA ACAACTACAT GGTTCGCCGC GCTGACCGTA TCCTGACCGG TGCTCCGGAC CTGTCCACTC GCCTGCGAGA CCGGACTGCG ACGACGCCAG GTCGTTTCTC GGCTGATGTC GATGGTGCCA ATGTCACCAT GAATTTTGCT GGCAGCCTGT CGGGCCTGCG CAACCACGCC AAGGCCAATG AGCGCCAAGT GCCTGACGGT CCGCAGCTGG CGGAGTCGGG CGCGGCCCGC TTCGACGCCT GGTTCTCTGC AAGTTATGAT GCGCTGGATG ATGACAGGGC GGGCGACCAG GCCGACAGCC GGTTTGGTCT GTTCCAGCTG GGCGCGGACT GGCTTGTGGC CGACAATGCG TTGGTCGGCA TCATGGTCCA GATCGATCAG ATGAGCGAGA CTGCAGACAA TCCGGTCGAG GCCGCGGGTG CAGTCAGCGG CGCGGAGATA GACGGGACGG GCTGGATGGC CGGCCCCTAT GCCGTCTGGG AATTCGCCCC GGGTACCACG CTGGATGTCC TCGCCATGTG GGGCCGGTCG GAGAACACCA TCAATCCACT TGGCTTCTAC GAGGATGAGT TCGAAACGAC GCGTTACATG ATTCGCGCAA ACCTCACCGG GGAGTGGTCT GCGCCGCGTT CCGACGCTGG CCAGCTCAAA GTCCGTCCGG GCATTTCCTG GGCGCATTAT GAAGAGACGC AGGATGGATA TACCGACAGC CTGGCGATCG CGATCCCGGA GCAGACAATC TCGGTCGGAC GGCTGGAAGC CGGGCCGGAG ATCGCCTATC GAATGGATGG CCAGCGGCCG GGCAGCTGGT GGGAGCCAAC TGCAGCTGTC AGAGCCGTCT GGGACTATGA TGGTGCCGAT CTGATGGATG AAACCGGGCG CAGCATTGAT GATGGCCAGC TTCGCGCTGA TGCCTCATTG GGGCTGCGAG GACAGTGGGC CAATGGTGCT CATGTGTCGG CGCAAGCGCG CTTCTCGGGC CTCGGGAACA ATGACTTCAG CGCCAATGGC GTGAGGGTCG AATTGCGAAT GCCATTCTAG
|
Protein sequence | MAAVNRGVRT DAKAGAPRRV SMLLAGIALG FSAPVHAADN ASVSRVQLLI DRQCTAASPT VFGTTVAYTG TVDDLPGNAN VGDIVQIYHL DGNNSVVARN SGYAGSLNAQ VGVQSGANAA TLMIATPATH PYTAVLWDAT TDTFAFNAGD TLDVNAPEVL ATMSFDMNAL DADCPGGPAA DTTPPQLASI ERSTPADEFT SYDFLVWRVT FDEDVQGLDT NDFAISGTTA SIDTVTAGSG ASEYSVRARG GDLATLDGVV SLSISGSATI EDTAGNSLTN TAATGATETY TLDNTAPTVT FTNGTPDPAT GAFQLTATLS EAVDQFSTDG ITVGNGTLSN IVAVSGTVYT ATVTPTTRTL VTIDMPFGWA VDLAGNINSA ATQLVVDVSI DTTPPTVALT SSATSPTNAP FTVTATFSED VTGFDASDLQ VTNGAASNTQ MASASVYTAT VTPAADGDVV ITVPAGAAQD GTSNASLAAT PVTIVFDATA PTVAIAANVG PTVGGPFEAT FTFSESVTGF AEGDITVGNG TASNVNGVSQ SVYTATITPA ADGQVTIDVA AQAAFDLAGN FSTAAAQFTI TKVSDAIPPD VVLSTSATDP VSGAFAITAT FSEDVTGFEL ADLVVGNGVA SNFSAVSASV YTADITPTTD GAVTVDVATG AANDGAGNPS TAAAQFSISS DATPPGLAIS LPGATVEGTF TATFTFSEGV TGFELSDITV TNGAASALTP GATGVYTATI TPETVGALTV SVAEGAAQDS AGNGSAADSA SVEVVFPAVD VDLDLGSTVL DPNSVTTTVT LSNPGSLAVD FVASVDVPWA DVTPSSGTIP ASGSIQFTVG LNAEADGLDP GDYSGTVTVT TAAPAGQAAQ ASRGPASAGS TVLANIPVTA SIAARFGSLQ VVATTPGGTH GDETFTYASS DADLGGLSLT TSGGAASSAP IQKIFGTYDL AQSLPQGWAL ESLTCAGDTD GGSVIDLAAG SVDIDLDPSE TIVCTFANTR DADAVRLATL RAINNYMVRR ADRILTGAPD LSTRLRDRTA TTPGRFSADV DGANVTMNFA GSLSGLRNHA KANERQVPDG PQLAESGAAR FDAWFSASYD ALDDDRAGDQ ADSRFGLFQL GADWLVADNA LVGIMVQIDQ MSETADNPVE AAGAVSGAEI DGTGWMAGPY AVWEFAPGTT LDVLAMWGRS ENTINPLGFY EDEFETTRYM IRANLTGEWS APRSDAGQLK VRPGISWAHY EETQDGYTDS LAIAIPEQTI SVGRLEAGPE IAYRMDGQRP GSWWEPTAAV RAVWDYDGAD LMDETGRSID DGQLRADASL GLRGQWANGA HVSAQARFSG LGNNDFSANG VRVELRMPF
|
| |