| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0242 |
|---|
| Symbol | |
|---|
| ID | 4286362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 256369 |
|---|
| End bp | 257337 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638139705 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_755473 |
|---|
| Protein GI | 114568793 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGCG CCCTGATCCT GTCTCTCCTT CTGGCCGCCC CGGCGTCGGC CCAGGACACT
GTCCCTCATG AAGTGACCCT GAGCCGAGTG GCGGACCGCA AGGCGGTATT CGCAACGGTC
GAAAGTGTCG ACACGGTGCG GGCGCGGGCC CGGATTGGCG GCACGATCGG CGAATTGCGG
GTCGATGAGG GCGATGCGGT TGAGGCTGGC GACGTGCTCG CCGTCGTCAT CAATGATCAA
CTGGCGCCGC AGATCGGCTC TGCCAATGCC GCCGCGGCGG CGCTCAATTC CCAGCTCGCG
CAAGCACGGA TCGATCTGGA GCGGGCTGAA GACCTGTTCG CCCGGGGCAT TTTCCCGCAA
GCGCGGCTGG ACGAGGCCGA AACCCAGGTC AATGTGTTGG CCAACCAGCT TGATGCCGCT
CGCCGCGGGC GCGATGTGCT GGTCCAGCAG GCCCGCGAAG GTGATGTGCT GGCGCCATCG
AGTGGCCGGG TCCTGTCGGT TGACGTCACC GCTGGCAGTG TGGTGCTTCC CGGCGAGCCG
CTCGCCGTGA TCGCCTCGGA GCTCTATCTC CTGCGCCTGC GACTGCCGGA GCGTCATGCC
CGGTCCATCG AGGTTGGTGA TACGGTCGAA GTCGATGCGG CCGCCCTCGG GGATGCCGTG
GCGCAAAGCG GCCAGATCCG CCAGGTCTAC CCGCGGATTG CCGAGGGACG GGTCGTCGCC
GACGCAGTGG TGGAGGGGCT CGGAAGCTTC TTCGTCGGTG AGCGGGTCCG GGTCTATGTG
TCGGTCGATG AGCGCGACGC GCTGCTGGTC CCGGCTGGTC TGATCGTTAC CCGTTACGGC
ACCGACTATG TCCGTCTCGA TACCCCGGAG GGCGAACGCG ATGTCGCGGT CCTGCGCGGT
GAAACGCATC CGGGCGGCAT TGAAATCCTC AGCGGCCTGT CGGTCGGCGA CCTCTTGGTG
CAGCCATGA
|
|---|
| Protein sequence | MLRALILSLL LAAPASAQDT VPHEVTLSRV ADRKAVFATV ESVDTVRARA RIGGTIGELR
VDEGDAVEAG DVLAVVINDQ LAPQIGSANA AAAALNSQLA QARIDLERAE DLFARGIFPQ
ARLDEAETQV NVLANQLDAA RRGRDVLVQQ AREGDVLAPS SGRVLSVDVT AGSVVLPGEP
LAVIASELYL LRLRLPERHA RSIEVGDTVE VDAAALGDAV AQSGQIRQVY PRIAEGRVVA
DAVVEGLGSF FVGERVRVYV SVDERDALLV PAGLIVTRYG TDYVRLDTPE GERDVAVLRG
ETHPGGIEIL SGLSVGDLLV QP
|
|---|
| |