Gene Swol_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2548 
Symbol 
ID4282312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2907037 
End bp2908083 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content40% 
IMG OID638139433 
Producthypothetical protein 
Protein accessionYP_755207 
Protein GI114568053 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCCT TTCGCGAAGA TAAGCTACTG GCCACGAATG TTCCCATGCG CATCGTTAGT 
TTAATATCAA AAATAAATGA GTATAAGGGG AAGCAAGTCC TTTATAACCA GCAGGCTCCC
GAGGTTTTAA ATACTCTTAA AAATGTTGCC ATCATCCAGA GTACCAGAGC CTCAAATAGC
TTAGAAGGCA TAACCATTAA AGATACACGG TTAATTGATA TTATGCAGAA TAAGGTACAG
CCGGCCAATC GTTCAGAAGG AGAAATAGCG GGTTACCGGG ATGTATTGGC AACCATTCAT
AGTTCTTATG ACGCAATTCC GGTAAAGCCT TCGATACTTC TTCAATTTCA TAGGGATCTC
TACAGATTTA TTTCGCTTGA AGGGGGCTCG TGGAAGAACA GCGATAATGC AATTGAAGAG
GTATACCCTG ATGGGTCAAA GTTTGTTAGA TTCAATCCAG TATCCAGTTT TGCCACTCCG
GGGGCAATAG AAGAATTATG TAAGTTTTAT AATCAATACA GCAATAGTGG TGAGATCGAT
TCTCTTATGT TAATATCAGC CACCATACTG GATTTTCTTT GCATACATCC CTTTTGTGAT
GGGAATGGCC GTATGGCAAG GTTGCTAACT TTGTTGCTTC TATATAAAGA AGGTTACGAG
GTGGGAAGAT TCATCAGTTT GGAACAAATT ATTGAAGAGA GCAAGGACGC TTATTATGAT
ACTCTTTATC AATCTTCACA AAATTGGCAT GAAGGAAAAC ATGATCTGTT GATATGGAGC
GAATACCTGC TGGGGATTAT CCTGGCTGCA TATAAAGAAC TTATGGATCG GGTAGGTAAA
GTTAGCCGCG CGAGGGGCAA TAAAGCTATG CGGGTGGAAG AAACCATAGA TCATTTTGTA
AGCAATTTTT CTATTAATGA TATCAGACGC AGATGCCCAG ATATTAGCCC TTCGACTATT
AATCGGGTGT TAGCCAAACT TAGAGATGCA AATAAGATCG AAGTGTTAGG AATAGGACGG
GGAGCGAAAT GGAAGAAAAA TTATTAG
 
Protein sequence
MMSFREDKLL ATNVPMRIVS LISKINEYKG KQVLYNQQAP EVLNTLKNVA IIQSTRASNS 
LEGITIKDTR LIDIMQNKVQ PANRSEGEIA GYRDVLATIH SSYDAIPVKP SILLQFHRDL
YRFISLEGGS WKNSDNAIEE VYPDGSKFVR FNPVSSFATP GAIEELCKFY NQYSNSGEID
SLMLISATIL DFLCIHPFCD GNGRMARLLT LLLLYKEGYE VGRFISLEQI IEESKDAYYD
TLYQSSQNWH EGKHDLLIWS EYLLGIILAA YKELMDRVGK VSRARGNKAM RVEETIDHFV
SNFSINDIRR RCPDISPSTI NRVLAKLRDA NKIEVLGIGR GAKWKKNY