230 homologs were found in PanDaTox collection
for query gene Swol_2548 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008346  Swol_2548  hypothetical protein  100 
 
 
348 aa  719    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3993  filamentation induced by cAMP protein Fic  46.08 
 
 
353 aa  285  8e-76  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.284344 
 
 
-
 
NC_010816  BLD_1551  hypothetical protein  47.12 
 
 
314 aa  281  1e-74  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3636  filamentation induced by cAMP protein Fic  40.06 
 
 
353 aa  268  1e-70  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.791773  normal 
 
 
-
 
NC_008782  Ajs_0834  filamentation induced by cAMP protein Fic  41.09 
 
 
346 aa  258  1e-67  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE0061  fic family protein  42.04 
 
 
348 aa  243  3.9999999999999997e-63  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2034  filamentation induced by cAMP protein Fic  36.02 
 
 
348 aa  227  3e-58  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.103507  normal 
 
 
-
 
NC_011772  BCG9842_B1710  hypothetical protein  30.55 
 
 
347 aa  183  3e-45  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000000000213679 
 
 
-
 
NC_010184  BcerKBAB4_2342  filamentation induced by cAMP protein Fic  30.26 
 
 
347 aa  167  2.9999999999999998e-40  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0305415  n/a   
 
 
-
 
NC_013165  Shel_24620  hypothetical protein  30.21 
 
 
346 aa  155  1e-36  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.996918  normal 
 
 
-
 
NC_009483  Gura_1281  filamentation induced by cAMP protein Fic  33.21 
 
 
349 aa  148  1.0000000000000001e-34  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0903  filamentation induced by cAMP protein Fic  30.55 
 
 
347 aa  148  1.0000000000000001e-34  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.000226959 
 
 
-
 
NC_008609  Ppro_0096  filamentation induced by cAMP protein Fic  33.33 
 
 
349 aa  147  3e-34  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4167  filamentation induced by cAMP protein Fic  35.43 
 
 
351 aa  145  8.000000000000001e-34  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.120401  normal 
 
 
-
 
NC_013173  Dbac_2308  filamentation induced by cAMP protein Fic  31.25 
 
 
349 aa  139  6e-32  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3513  filamentation induced by cAMP protein Fic  31.25 
 
 
369 aa  138  1e-31  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_002978  WD0346  Fic family protein  27.7 
 
 
360 aa  131  2.0000000000000002e-29  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.361104  n/a   
 
 
-
 
NC_002978  WD0365  Fic family protein  32.41 
 
 
348 aa  129  8.000000000000001e-29  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0831  AsnC family regulatory protein  28.28 
 
 
349 aa  128  1.0000000000000001e-28  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.00000000889639  n/a   
 
 
-
 
NC_011060  Ppha_1972  filamentation induced by cAMP protein Fic  30.89 
 
 
349 aa  121  1.9999999999999998e-26  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.335925  n/a   
 
 
-
 
NC_009727  CBUD_2174  Fic family protein  23.03 
 
 
348 aa  81.6  0.00000000000002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2207  hypothetical protein  23.03 
 
 
348 aa  81.6  0.00000000000002  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.00000284697  n/a   
 
 
-
 
NC_002978  WD1314  Fic family protein  23.34 
 
 
359 aa  74.7  0.000000000002  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.148349  n/a   
 
 
-
 
NC_010506  Swoo_4924  filamentation induced by cAMP protein Fic  24.74 
 
 
369 aa  72.8  0.000000000008  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.0000928256 
 
 
-
 
NC_013216  Dtox_4190  filamentation induced by cAMP protein Fic  25 
 
 
367 aa  70.9  0.00000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_4959  Fic family protein  26.69 
 
 
431 aa  69.7  0.00000000007  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3396  filamentation induced by cAMP protein Fic  26.67 
 
 
222 aa  69.7  0.00000000007  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.342322  normal  0.190487 
 
 
-
 
NC_010498  EcSMS35_3916  Fic family protein  26.69 
 
 
431 aa  69.7  0.00000000007  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0373  filamentation induced by cAMP protein Fic  24.57 
 
 
371 aa  66.2  0.0000000009  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.5223  n/a   
 
 
-
 
NC_007514  Cag_1441  hypothetical protein  27.05 
 
 
367 aa  64.7  0.000000002  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5696  filamentation induced by cAMP protein Fic  22.98 
 
 
358 aa  64.7  0.000000002  Conexibacter woesei DSM 14684  Bacteria  decreased coverage  0.00196433  normal 
 
 
-
 
NC_009051  Memar_1471  filamentation induced by cAMP protein Fic  24.93 
 
 
369 aa  64.7  0.000000002  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009253  Dred_0937  filamentation induced by cAMP protein Fic  22.87 
 
 
368 aa  65.1  0.000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5763  filamentation induced by cAMP protein Fic  28.49 
 
 
374 aa  64.3  0.000000003  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2315  filamentation induced by cAMP protein Fic  22.46 
 
 
376 aa  64.3  0.000000003  Maricaulis maris MCS10  Bacteria  normal  0.655269  normal 
 
 
-
 
NC_008544  Bcen2424_6128  filamentation induced by cAMP protein Fic  28.49 
 
 
374 aa  64.3  0.000000003  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.399772 
 
 
-
 
NC_010512  Bcenmc03_6610  filamentation induced by cAMP protein Fic  28.49 
 
 
374 aa  63.9  0.000000004  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.763797  normal  0.578306 
 
 
-
 
NC_007509  Bcep18194_C7631  filamentation induced by cAMP protein, Fic  28.29 
 
 
386 aa  63.9  0.000000004  Burkholderia sp. 383  Bacteria  normal  normal  0.223579 
 
 
-
 
NC_013512  Sdel_0460  filamentation induced by cAMP protein Fic  35.09 
 
 
388 aa  63.5  0.000000005  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4935  filamentation induced by cAMP protein Fic  28.99 
 
 
373 aa  63.2  0.000000006  Burkholderia ambifaria AMMD  Bacteria  normal  0.684685  normal  0.113714 
 
 
-
 
NC_009429  Rsph17025_3792  hypothetical protein  25 
 
 
365 aa  63.2  0.000000007  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5385  filamentation induced by cAMP protein Fic  24.27 
 
 
370 aa  62.4  0.00000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_1635  filamentation induced by cAMP protein Fic  27.37 
 
 
326 aa  62.4  0.00000001  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_013512  Sdel_2002  filamentation induced by cAMP protein Fic  37.5 
 
 
375 aa  62  0.00000001  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.733317  n/a   
 
 
-
 
NC_010159  YpAngola_A3867  hypothetical protein  22.94 
 
 
380 aa  61.2  0.00000002  Yersinia pestis Angola  Bacteria  normal  0.0777828  normal  0.0227388 
 
 
-
 
NC_007498  Pcar_2123  hypothetical protein  24.43 
 
 
368 aa  61.6  0.00000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0896  Fic family protein  22.94 
 
 
380 aa  61.2  0.00000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3843  filamentation induced by cAMP protein Fic  24.01 
 
 
368 aa  62  0.00000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0951  filamentation induced by cAMP protein Fic  22.94 
 
 
380 aa  61.2  0.00000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0037  filamentation induced by cAMP protein Fic  28.02 
 
 
392 aa  61.6  0.00000002  Methanococcus maripaludis C6  Archaea  normal  0.450631  n/a   
 
 
-
 
NC_009943  Dole_0416  filamentation induced by cAMP protein Fic  25.49 
 
 
336 aa  60.8  0.00000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0731  filamentation induced by cAMP protein Fic  24.58 
 
 
446 aa  60.8  0.00000003  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3472  filamentation induced by cAMP protein Fic  23.62 
 
 
333 aa  60.5  0.00000004  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6451  filamentation induced by cAMP protein Fic  24.27 
 
 
378 aa  60.5  0.00000004  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0184045 
 
 
-
 
NC_008786  Veis_4586  filamentation induced by cAMP protein Fic  29.63 
 
 
372 aa  60.5  0.00000005  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.459231 
 
 
-
 
NC_009831  Ssed_4506  filamentation induced by cAMP protein Fic  31.11 
 
 
365 aa  60.1  0.00000005  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000000280664 
 
 
-
 
NC_010581  Bind_0293  filamentation induced by cAMP protein Fic  26.71 
 
 
219 aa  60.1  0.00000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1955  filamentation induced by cAMP protein Fic  23.32 
 
 
333 aa  59.7  0.00000008  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.484154  n/a   
 
 
-
 
NC_009135  MmarC5_0625  filamentation induced by cAMP protein Fic  27.17 
 
 
392 aa  59.7  0.00000008  Methanococcus maripaludis C5  Archaea  normal  0.849792  n/a   
 
 
-
 
NC_013173  Dbac_1366  filamentation induced by cAMP protein Fic  30.61 
 
 
371 aa  59.7  0.00000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_2003  fic family protein  23.95 
 
 
377 aa  59.3  0.00000009  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.0278833  n/a   
 
 
-
 
NC_009051  Memar_2116  filamentation induced by cAMP protein Fic  26.42 
 
 
426 aa  58.9  0.0000001  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0664  filamentation induced by cAMP protein Fic  26.34 
 
 
434 aa  58.5  0.0000002  Methanococcus aeolicus Nankai-3  Archaea  normal  0.0557891  n/a   
 
 
-
 
NC_013510  Tcur_4789  filamentation induced by cAMP protein Fic  21.83 
 
 
282 aa  58.2  0.0000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5477  filamentation induced by cAMP protein Fic  32.09 
 
 
367 aa  58.2  0.0000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4648  hypothetical protein  26.67 
 
 
384 aa  58.2  0.0000002  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00489554  normal 
 
 
-
 
NC_008048  Sala_2616  filamentation induced by cAMP protein Fic  26.9 
 
 
368 aa  58.2  0.0000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0010  hypothetical protein  23.73 
 
 
383 aa  58.2  0.0000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3312  hypothetical protein  26.9 
 
 
376 aa  58.2  0.0000002  Bradyrhizobium sp. BTAi1  Bacteria  decreased coverage  0.00970462  normal 
 
 
-
 
NC_002967  TDE2641  Fic family protein  22.78 
 
 
328 aa  57.8  0.0000003  Treponema denticola ATCC 35405  Bacteria  unclonable  0.000000103829  n/a   
 
 
-
 
NC_010501  PputW619_4817  filamentation induced by cAMP protein Fic  26.35 
 
 
379 aa  57.8  0.0000003  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4758  filamentation induced by cAMP protein Fic  21.93 
 
 
373 aa  57.8  0.0000003  Polaromonas sp. JS666  Bacteria  normal  normal  0.179333 
 
 
-
 
NC_011883  Ddes_2357  filamentation induced by cAMP protein Fic  25.32 
 
 
371 aa  57.4  0.0000003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3067  filamentation induced by cAMP protein Fic  29.25 
 
 
374 aa  57.4  0.0000003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_03140  hypothetical protein  24.72 
 
 
331 aa  57.4  0.0000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.148194  hitchhiker  0.000000000000117198 
 
 
-
 
NC_004116  SAG2119  hypothetical protein  29.49 
 
 
373 aa  57.4  0.0000004  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_4575  filamentation induced by cAMP protein Fic  24.19 
 
 
377 aa  57  0.0000004  Spirosoma linguale DSM 74  Bacteria  normal  0.76172  normal 
 
 
-
 
NC_009512  Pput_0676  filamentation induced by cAMP protein Fic  24.57 
 
 
394 aa  57  0.0000004  Pseudomonas putida F1  Bacteria  normal  0.721165  normal  0.0136984 
 
 
-
 
NC_011830  Dhaf_4488  filamentation induced by cAMP protein Fic  23.53 
 
 
380 aa  57  0.0000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1723  MloA protein, putative  28.93 
 
 
356 aa  57  0.0000005  Campylobacter jejuni RM1221  Bacteria  normal  0.325605  n/a   
 
 
-
 
NC_007519  Dde_2494  hypothetical protein  25.28 
 
 
342 aa  57  0.0000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_28800  hypothetical protein  25.63 
 
 
331 aa  57  0.0000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000000000287413  decreased coverage  0.000000000406133 
 
 
-
 
NC_011666  Msil_1166  filamentation induced by cAMP protein Fic  24.17 
 
 
252 aa  56.6  0.0000006  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0608775 
 
 
-
 
NC_008340  Mlg_0509  filamentation induced by cAMP protein Fic  25.67 
 
 
387 aa  56.6  0.0000006  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_2358  filamentation induced by cAMP protein Fic  21.92 
 
 
371 aa  56.6  0.0000006  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1350  filamentation induced by cAMP protein Fic  24.74 
 
 
443 aa  56.2  0.0000007  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.470357 
 
 
-
 
NC_013385  Adeg_0799  filamentation induced by cAMP protein Fic  22.84 
 
 
267 aa  56.6  0.0000007  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3955  filamentation induced by cAMP protein Fic  29.46 
 
 
384 aa  55.5  0.000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5004  filamentation induced by cAMP protein Fic  23.3 
 
 
381 aa  55.8  0.000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0995  filamentation induced by cAMP protein Fic  31.58 
 
 
386 aa  55.8  0.000001  Opitutus terrae PB90-1  Bacteria  normal  0.0390266  hitchhiker  0.00286673 
 
 
-
 
NC_008781  Pnap_3980  filamentation induced by cAMP protein Fic  25.93 
 
 
408 aa  55.8  0.000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.231273 
 
 
-
 
NC_009665  Shew185_0359  filamentation induced by cAMP protein Fic  31.53 
 
 
375 aa  55.5  0.000001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0523  Fic family protein  25.21 
 
 
376 aa  55.1  0.000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0980  hypothetical protein  31.09 
 
 
367 aa  55.1  0.000002  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.0812833  n/a   
 
 
-
 
NC_011060  Ppha_0970  filamentation induced by cAMP protein Fic  27.78 
 
 
247 aa  54.7  0.000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.952557  n/a   
 
 
-
 
NC_009955  Dshi_3755  filamentation induced by cAMP protein Fic  27.36 
 
 
372 aa  55.1  0.000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0523363  normal  0.297865 
 
 
-
 
NC_013385  Adeg_0810  filamentation induced by cAMP protein Fic  24.06 
 
 
267 aa  55.1  0.000002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2057  filamentation induced by cAMP protein Fic  24.66 
 
 
377 aa  55.1  0.000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.280737  normal 
 
 
-
 
NC_008942  Mlab_0909  hypothetical protein  26.06 
 
 
328 aa  54.7  0.000002  Methanocorpusculum labreanum Z  Archaea  normal  0.27357  normal 
 
 
-
 
NC_011365  Gdia_1770  filamentation induced by cAMP protein Fic  25.65 
 
 
370 aa  55.1  0.000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.385293  normal 
 
 
-
 
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