Gene Swol_2450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2450 
Symbol 
ID4283675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp2779994 
End bp2780635 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content48% 
IMG OID638139334 
ProductTetR family transcriptional regulator 
Protein accessionYP_755110 
Protein GI114567956 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGG AGGAACGGAT TTGTAATGCC TGTCTTGAGC TGGCCCGGCT GCGGGGCCTG 
CATGGATTCA CCGTAGATGA ACTGGCGAAC CAAGCGGGAA TAAGCAAAAG AACTATCTAC 
CGTTACTTTC GCAGTAAGGA TGAAATAATT GAGGCCGCTG TAAACCGCTT CCTGGTTGAA 
GTGGCGGCTG CAGCCGACCA TATCCTGGCG GTGGAAAGCG ACCCCATAAA TATTTCTAAT 
TACATTCTAA ATTATCTCTT TAAGCACGGC CATTTTATCA TCAGTACCAG CGGGCTAAAT 
GACCTGCGGC AATATTACCC CCATCTCTGG CAAAAAATCG ACCGCTTCCG CCTGGAACGA 
GTGCAGGCGG TTATTAGTGC CATAAGTCAA AAGGAGGGTA CCGAGTTCCT GCTGGATTGC 
GATCCGCTCA TACTGGTTAC CGTAATAAGC ACATCCATTC AAGCGGTTTT AAACCCGGAC 
TTTCTGCTGG AAAACGGGCT AAGCTTCGAA AAAGCTGCTA AAGATTTAAG CCAGCTCTTT 
TTGTCAAGCA TATCACAGGG ACGGTCCGAA ACCACTGAAA AAGTATCCTT TTTAAGCCGC 
CTGGGCGGCT ACCCAGTCAC AATCTGGTCG GTTAACCACT AA
 
Protein sequence
MDMEERICNA CLELARLRGL HGFTVDELAN QAGISKRTIY RYFRSKDEII EAAVNRFLVE 
VAAAADHILA VESDPINISN YILNYLFKHG HFIISTSGLN DLRQYYPHLW QKIDRFRLER 
VQAVISAISQ KEGTEFLLDC DPLILVTVIS TSIQAVLNPD FLLENGLSFE KAAKDLSQLF 
LSSISQGRSE TTEKVSFLSR LGGYPVTIWS VNH