Gene Swol_2257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2257 
Symbol 
ID4283063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2600348 
End bp2601589 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content40% 
IMG OID638139137 
Productrestriction endonuclease S subunits-like protein 
Protein accessionYP_754919 
Protein GI114567765 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTA AAGAGTGCGA AAAAACACAA CTGCGGAAAA TAGTGACTAT TGAGAAAGGT 
AAGCCTCCTG CCAAGCAACC TTTCTTTGAA CAGAACGCTG AGTTATATCT AACGCCAGAA
TATTTGAGAG GAAGGAATTT GGCAGAACCT GTCCTCCCCG GCTCAAATGC AGTTCGGGTT
AAAGATGGTG ATACGATTCT CTTATGGGAC GGATCAAATG CAGGAGAGTT CTTTAGAGCT
AGAGAAGGTG TCCTTGCATC TACCATGGTA CGAATCTGGC ACGATGACAC ATACGATAAC
CAATACTTTT ATTACGCAGT TAAGAACTGG GAACTTTTTC TTAAAGGGCA GACATCAGGT
TCTGGTATTC CCCACGTAGA TAAAGAAATT CTCGGTAACA TCGAAATTTT AAAGTACTCC
AAACCTGAAC AGACTAAAAT TGCTAAGATC CTATCAACGG TGGATGAGGC AATTGAACAA
ATTGAAGCCT TGATTAACAA GCAACAGCGT ATTAAAACTG GTCTGATGCA AGAACTTCTC
ACCCGTGGTA TCGATGAATA CGGTAATATT CGCTCGGAAC AAACCCATAA ATTTAAAGAC
TCCCCCTTAG GTAGGATTCC GGTGGAGTGG GATGTTATTC CTTTGGGTGA TTTAATCGAA
GCTATTGATC CGCAGCCAGA TCACCGCACC CCACAAGAAG TTTCCGGTGG TATTCCGTAT
ATCGGTGTTA GTAATTTTAA TAATGATGGA AGTATTGACT TTACTAACGC TAGAAAAGTA
TCAATAAAAG CCTTTAAGAA ACAACAGGAT TCTTTTTCTG TTTCTGAAGG TGATTTTATC
TTCGGTAAAA TAGGTACTAT CGGAATGCCA AGCCGTTTAC CTACTTCTAC GCAATATGCC
TTAAGTGCTA ACGTTATATT ACTTAAACCC CGAGAGACTC CTGCCTTTTT TTATTGGTGG
ATATCATCAC CTATTGTTAG TAAAATGGTT GAACTTGAAA TCCATAGCAC ATCACAAGCA
GCTTTTGGTA TTAAGAAAAT GAGGACTTTA AATTTGCCAA GGCCAAACAA AGATGAGCGT
GAAAAAATCG GGAAGGTATT GGATACTCAA GAGCTAGTTA AGCTCAATAC AAAAAGAGAT
TTATATAAAC TTCACTCCCT GAAAACCGCT CTTATGCAAG ACCTTCTCTC GGGGAAGAAA
CGAGTCACTC CGCTGATAAA TGAAACGGAG GTGATTACCT AA
 
Protein sequence
MKPKECEKTQ LRKIVTIEKG KPPAKQPFFE QNAELYLTPE YLRGRNLAEP VLPGSNAVRV 
KDGDTILLWD GSNAGEFFRA REGVLASTMV RIWHDDTYDN QYFYYAVKNW ELFLKGQTSG
SGIPHVDKEI LGNIEILKYS KPEQTKIAKI LSTVDEAIEQ IEALINKQQR IKTGLMQELL
TRGIDEYGNI RSEQTHKFKD SPLGRIPVEW DVIPLGDLIE AIDPQPDHRT PQEVSGGIPY
IGVSNFNNDG SIDFTNARKV SIKAFKKQQD SFSVSEGDFI FGKIGTIGMP SRLPTSTQYA
LSANVILLKP RETPAFFYWW ISSPIVSKMV ELEIHSTSQA AFGIKKMRTL NLPRPNKDER
EKIGKVLDTQ ELVKLNTKRD LYKLHSLKTA LMQDLLSGKK RVTPLINETE VIT