Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2252 |
Symbol | |
ID | 4283058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 2591597 |
End bp | 2592514 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638139132 |
Product | phage integrase |
Protein accession | YP_754914 |
Protein GI | 114567760 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.442177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATAC GGGTTCATAT TAAACCCGCG ATCGGTAATA TAAAATTGGC GAAACTGCAT CCCCATCACC TTCAGAAGCT GTATAACGAT AAGATAGAGA ACGGTCGTCA TGACGGTCGG GGTGGATTAT CAGCCAGGAC GGTCGAACTA ATCCACATCG TGCTGCATTC GGCCTTATCA CAGGCTATTA AAGAAGGTCT GGTAGTTCGA AACGTAAGTG AGGCCACTAA GCGTCCACGA CGCGAGAAGA AGGAGATGCG TGTACTGACG GAAGAACAAA CAAGGCTTCA GGCGGTTCTC AATACCGAGC GCTTGGGAAC GGCTTTCCTG GTTGACCTAG GGACTGGTAT GCGCTGTGGG GAACTCCTGG CATTGAAGTG GGAGAATGTC GATCTTAACG AGGGTGTAAT TCGCGTCCAG CAATCTTTGA CCCGAATCCG GGTTGAAGAC AGTTCTTTAA AAACTGAGTT ACGCTTCCAA CCGCTGAAAA CAGTCAAGAG TAGACGAAGT ATCCCAATAC CTCAATCGGT AATTGCAGCT CTTAAGAGTC ATAAGTCCCG TCAGAATCAG GAGAAACTGA AGGCTGGAGC TGCATATAAT GATCTAGGCC TAGTGTTTTG TACCGAACTG GGACAACCCA TTGATCCTCG AAACTTGACT CGAACTTTTA ATAGGCTTCT GGAACGAGCT GGCATACCAA AAGCAACATT GCACTCTATG CGACACTCTT ATGCTACCCG CTTATTGGAA ATGAATGAAC ACCCCAAAGT AGTACAGGAA CTGATGGGGC ACTCCCAGAT CAGCATGACA CTAGACACAT ACAGTCATGT TATGCCAGAG ATCAAACAGG CCGCAGCAGC GAAGCTGGAC GATCTGCTGA TAACAAAAAG TCCTCCCGCA GAGGAAGGAC ACAAGTAA
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Protein sequence | MLIRVHIKPA IGNIKLAKLH PHHLQKLYND KIENGRHDGR GGLSARTVEL IHIVLHSALS QAIKEGLVVR NVSEATKRPR REKKEMRVLT EEQTRLQAVL NTERLGTAFL VDLGTGMRCG ELLALKWENV DLNEGVIRVQ QSLTRIRVED SSLKTELRFQ PLKTVKSRRS IPIPQSVIAA LKSHKSRQNQ EKLKAGAAYN DLGLVFCTEL GQPIDPRNLT RTFNRLLERA GIPKATLHSM RHSYATRLLE MNEHPKVVQE LMGHSQISMT LDTYSHVMPE IKQAAAAKLD DLLITKSPPA EEGHK
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