Gene Swol_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2228 
Symbol 
ID4283069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2565590 
End bp2566249 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content52% 
IMG OID638139108 
Productinner-membrane translocator 
Protein accessionYP_754890 
Protein GI114567736 
COG category[R] General function prediction only 
COG ID[COG1079] Uncharacterized ABC-type transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCAGCG GGCTGGCCTT AACTATTTTC GGTACTGGTA TCAGTGGTTT CATGGGTAAG 
AGCTATCAGG GCATGCCTGC GGCTGATCCG TTTCGACCGA TATCAGTTCC GGTTCTGGGT
GATATACCAG TCCTGGGACC CATATTATTT AAGCAGGATG CTCTGGTGTA TATCAGCCTT
ATACTGGCGA TTGGCCTCTG GTATATCCTC TTTCGAACCC GCTGGGGTCT GCGTATACGT
TCCGTGGGTG AAAACCCTGC GGTAGCAGAT GCGGTAGGAA TCAGTGTCAG CCGGGTAAGG
TATATTTGTA CCATATTGGG TGGTATGCTG GCTGGTCTGG GCGGGGCTTA TTTGTCTTTA
GCCTATGCCC CTTCCTGGCA GGAAAACATG ACCGCAGGAC GGGGATGGAT TGCGGTGGCA
CTGGTAATCT TTGCTCTCTG GAATCCATTA CGGGGACTTT TGGGTTCTTA CCTCTTCGGT
GGGGTTGAAG CATTAACCTT TCGTATCCAG ACCATCGGTA TCCATGTGTC ATCCTTTTTC
CTGGCCATGT TACCGTATTT GTTGACCATT CTTGTCTTGG TACTGGTTAC GATTCGTCTC
CGGCAGGAGG CAGGAGCACC ACGGGCTCTC GGGGTTCCTT ATGATCGCGA AGAACGATGA
 
Protein sequence
MVSGLALTIF GTGISGFMGK SYQGMPAADP FRPISVPVLG DIPVLGPILF KQDALVYISL 
ILAIGLWYIL FRTRWGLRIR SVGENPAVAD AVGISVSRVR YICTILGGML AGLGGAYLSL
AYAPSWQENM TAGRGWIAVA LVIFALWNPL RGLLGSYLFG GVEALTFRIQ TIGIHVSSFF
LAMLPYLLTI LVLVLVTIRL RQEAGAPRAL GVPYDREER