Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2110 |
Symbol | |
ID | 4283196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2428892 |
End bp | 2429656 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638138991 |
Product | ABC transporter related |
Protein accession | YP_754773 |
Protein GI | 114567619 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGGTCT TGACCCTGGA AGGAATCAGC CAGGAGTTCG GAGGTTTAAG GGCCCTGGAT GGGGTAAATA TGGTGGTGGA AGAAGGGGAG ATATTCGGTA TTATCGGCCC CAATGGAGCG GGTAAAACCA CCCTGTTTAA TATTATCACC GGTATATATA TTCCCAGCGA AGGGGACTTG ATTTTTAAGG AACAGAGGAT TAACCGTATG GCCACCCATA ATATCGCACG GCTGGGCATA GGGCGGACTT TTCAAAATAT CCGTCTTTTT AACAAGCTTT CGGTTCTGGA CAATGTGCGG GTCGGCAGCC ACGGCATCAG CCGCAGCGGC TTCTTTAAAA GCCTCCTGGG ACTGCCCTCC ATGTTGCGGG AAGAAAAGGA GATTAAGGGC CGGGCCGAGG AATTGCTGGA ACTGGTGGGT CTTTACGACA AGAAGATGGA ATATGCCGAC AACTTGGCTT ATGGGGAGCA AAGGCGACTG GAGATTGCCC GGGCCCTGGC ATTAAAGCCC AGTTTGCTAT TGCTGGATGA GCCCGCCGCT GGGATGAATA GCGGGGAAAA AGTTGAGTTG ATGAAATTGA TTGAGCAAAT CAGGCAGGAA ATGAAGCTTA CTATTTTACT GGTGGAGCAC GATATGAGCC TGGTGATGAA TATATGTGAG CGTATCGCCG TACTGGATTA CGGAAGAAAG ATTGCTGAGG GTCCACCGGA AGAAATAAAG AATGATGAAA GGGTAATACA GTCGTATCTG GGAGTAGGGG CATGA
|
Protein sequence | MPVLTLEGIS QEFGGLRALD GVNMVVEEGE IFGIIGPNGA GKTTLFNIIT GIYIPSEGDL IFKEQRINRM ATHNIARLGI GRTFQNIRLF NKLSVLDNVR VGSHGISRSG FFKSLLGLPS MLREEKEIKG RAEELLELVG LYDKKMEYAD NLAYGEQRRL EIARALALKP SLLLLDEPAA GMNSGEKVEL MKLIEQIRQE MKLTILLVEH DMSLVMNICE RIAVLDYGRK IAEGPPEEIK NDERVIQSYL GVGA
|
| |