| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2018 |
|---|
| Symbol | |
|---|
| ID | 4283308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2313652 |
|---|
| End bp | 2314806 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638138900 |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_754684 |
|---|
| Protein GI | 114567530 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAGAG AGGGAACTTT TGCCCTAGCC ATCTCGTCTA AAAACCGGGA GGAAAAAGTC
ATGAAATGTG AGCAGGTCAG TGAGCTGCTT TCAGCCTACA TTGATGAAAT GACAAGTGAG
AAAGAAACAA AAGCACTGGA AGCCCACCTT GCTCAATGTG CAGACTGCCG TAAAGAGCTG
GATGATTACC GGCTTCTTCG TGGTATTATG CAGCAATTGG AATCACCGCT GCCCCCGAAT
GATTTCTCCA CCGTTGTTCA AAAACGACTG CAGGAAAACA AAAACAAGAT ATTTAGTGCT
ACTACTATCG ACCGACCCAA AAAGACCGGA TGGATTGCGG CAGTATTGGC GGGATTAGCC
CTGGCGTCAG GTATATATGC CAGCAGCTAC CTATCTGTCG GGGATTTTCT TGTGTCCTGG
CAGAATAAAA AGGAACAGAA AAAACCCCGA ATAGCTATCG AGGATATAAT AGAGCGTTTT
CAAAAATGGA ATCAGGAAGA GGATAATAGC AACCGAGAAT CCGCTGAACC GGAAGCTCAG
ATTGACACTA ATCCCAGGGC CAAAGTGAGT GTGGGGGTAG GGGCGGTTAA TACCCAGGAA
GAAGTGGAGC CCAAGACTGC CGGGGATGAT AGCTATTCCA GCCATATAAT GGTGAAAGAA
CTGTCAACGG CCCTGGCTCA GGTAATAGAG ATTGCCGATG AGCGGGAAAT CAAATACAGT
ATGACATCCG GGTCTTATGG CAACAGTGAG GCGCGAAGGG TGGTCCTGGA AGTGGAACCG
CAAGAAGTCC CTCAGCTTCT AATGGAATTA GAAGCAATTG GGAGGAAGCT TGATGTTGCG
GATCTTATAG AAGCAAGTGG ACAGGATAAA GTGCTGCAAG CTCCTGATTT GGACGAAAAA
CCCCTACTGC TGGAGAAAAG CGAATTTTCC GATAGTGAGA AATTAAGCAT GGTTAAAATA
GAAAATAATG AGGAAGCAAG AGAAGATGAA AAAGAGGAAT TAGCTAAAGA AAAAGCGGCT
TCTGCGCCGG ATAATAAAAT GCTCTTTAAT TCCGAAAAGG GAGAAGATAC TAATAACATT
GAAGTTATTA TGGAAGAAAA CAAACCGGAA GGAACTAAAG TTAACTTAGA CATTTTGATA
ATTCAAGAAA AATGA
|
|---|
| Protein sequence | MGREGTFALA ISSKNREEKV MKCEQVSELL SAYIDEMTSE KETKALEAHL AQCADCRKEL
DDYRLLRGIM QQLESPLPPN DFSTVVQKRL QENKNKIFSA TTIDRPKKTG WIAAVLAGLA
LASGIYASSY LSVGDFLVSW QNKKEQKKPR IAIEDIIERF QKWNQEEDNS NRESAEPEAQ
IDTNPRAKVS VGVGAVNTQE EVEPKTAGDD SYSSHIMVKE LSTALAQVIE IADEREIKYS
MTSGSYGNSE ARRVVLEVEP QEVPQLLMEL EAIGRKLDVA DLIEASGQDK VLQAPDLDEK
PLLLEKSEFS DSEKLSMVKI ENNEEAREDE KEELAKEKAA SAPDNKMLFN SEKGEDTNNI
EVIMEENKPE GTKVNLDILI IQEK
|
|---|
| |