| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1992 |
|---|
| Symbol | |
|---|
| ID | 4283314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2274438 |
|---|
| End bp | 2276003 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638138873 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_754658 |
|---|
| Protein GI | 114567504 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1409] Predicted phosphohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCTGA ATTTAAAACT ACTGCGTGAT TCCAAACAGA AGGCCATATC TCTGCTCTTT
TTCCTGTTTC TGTTCAGCCT TTCGGGGGCA TTAAACCCGG ATATAGCTAC TACTGAGCCG
AGCGGCTTGC CTGATCATAT CATGCTATCC TGGACTGATG ATCCGCAGAC TACCCGGACT
ATGGCCTGGC GGAGCGATAG CGCTGCCGAT CAGGAATGGG TCCAGTACCT GCCTGCTGCC
AATTATAACG GTAGTTTTAC CAGTGCTTCC CGAGTGGCAG CAGTGAAAAC TGAGCTTTAT
ACCGGTTATT CCCATTGTGA AGCTACCTTG TTCCAGTTGG CCCCTGACTG CAAATATATA
TATCGTGTTG GGCGGGAAGG GGTCTGGAGT GAGCCTGCCT CCTTTTCCAC TGCTACCCCT
GGTGGCAAAT TTTCCTTCTT ATATTTGGGT GATGTTCAGA AAGGTTATGA CAAATGGGGA
GAAATGCTTA AGCACGTTGC CGCGGAAAAC CCCGATTTAA GATTTGCCCT CCTGGGTGGG
GATTTGGTTC ATGATGGCAA TAGCAACAAT GAATGGCAGC AGTTCTTTGC CGCTGCTTCC
CCGACCTTTA AACAGCTTCC CTTGCTGCCG GCAGCAGGTA ATCATGATGA TACGCCGTTA
TTCTGGAATT CATTTGCTAT GCCCCGGAAT GGCCCGGAAG GATTTAAGGA AGAATTTTAC
TCCTTTGACT ATGGCAATTG TCACATTGCG GTGCTAAACA GCAACAAAAT GGGCGTTTCC
AAACCTTATT ACAACACGCT CAAAAACTGG TTGCAGGATG ACCTTAATAA TAGCAAGCAG
CAGTGGAAGT TTCTAGTCTT CCACTATCCC CCTTACCCGG TGGTAGATGA TGGTCATTCT
TATAATTTAG AGGAAAACTG GGTGCCTTTT TTTGAACAAT GCGCGGTGGA TATAGTATTT
GTTGGTCACC AACACGTCTA CATGCGGAGC GAACCGTTGC GTGGGGGTAA GGTGCAGGCA
GATGGAGAAG GTATTGTTTA TATTATGGGC AATTCAGGAA GCAAGTTCTA TCCTGCTGGT
GAAGACAGAG AATATATCGC CAAGCAGGTG GCTAATGTCA GCAATTACCA ACTATTAAGC
ATTGATGGAG ACAGTCTTAG CTTGAGTTCC CGGAACGCTG AGGGGCTGGT TATTGACAGC
TATATACTGG GGAATGTGCC TGCAGCCCGG GCCCAGTATT TGATTGCTCC AATAAAAGAT
GCAAGTTACC AAATAGAGAC TAACGCCGAT GGTCTGGAAA TCATGACCGT GAATCAAGGC
AATTCGGGAT TAAAGTATTT TGGGGTAGAG CTAACCCCGG TAAAGCCTCA CGAAGGAATG
GAAACACTGA TTTTCATTCA CTTGAGAAAT GGAAAGCAAA TTAATTTGAA CGCTACCCAG
GCTGATTTTG ACCTGGTCAA GGCTGCTCAG GCAGGTTTTA ATGTCAAACC TGGAGATATA
GTCAAAACCT ATGTGCTTGA TGATTTAACT AATGCGCTTG ATTTTAATCC AATCGTATTG
CAATAA
|
|---|
| Protein sequence | MLLNLKLLRD SKQKAISLLF FLFLFSLSGA LNPDIATTEP SGLPDHIMLS WTDDPQTTRT
MAWRSDSAAD QEWVQYLPAA NYNGSFTSAS RVAAVKTELY TGYSHCEATL FQLAPDCKYI
YRVGREGVWS EPASFSTATP GGKFSFLYLG DVQKGYDKWG EMLKHVAAEN PDLRFALLGG
DLVHDGNSNN EWQQFFAAAS PTFKQLPLLP AAGNHDDTPL FWNSFAMPRN GPEGFKEEFY
SFDYGNCHIA VLNSNKMGVS KPYYNTLKNW LQDDLNNSKQ QWKFLVFHYP PYPVVDDGHS
YNLEENWVPF FEQCAVDIVF VGHQHVYMRS EPLRGGKVQA DGEGIVYIMG NSGSKFYPAG
EDREYIAKQV ANVSNYQLLS IDGDSLSLSS RNAEGLVIDS YILGNVPAAR AQYLIAPIKD
ASYQIETNAD GLEIMTVNQG NSGLKYFGVE LTPVKPHEGM ETLIFIHLRN GKQINLNATQ
ADFDLVKAAQ AGFNVKPGDI VKTYVLDDLT NALDFNPIVL Q
|
|---|
| |